Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00041 atgagaattgttgcttTCTTGGGTTGCTGTTGCTTTCAGTCTTGGGTTGCTGTTGCTTTCAGTCTTGGGTTGCTGTTGCTTTCAGTCTTGGGTTGCTGTTGCTTTCAGTCTTGGGTTGCTGTTGCTTTCAGTCTTGGGTTGCTGTTGCTTTCAGTCTTGGGTTGCTGTTGCTTTCTATATAGAAAGGAAAGAAAGAATCAACATGATATCCTCAAAGAAAGCTTTGGGAATGACATTACCTCTTTGGAGTCCTTGCAATTTGAATTAGCCACAATTGAAGCTGCAACAAACAGATTTGGTGTAGAAAACAGGATAGGGAAAGGTGGATTTGGAGAAGTCTACAAAGGAATTCTCTCAGATGGACAAGAAATTGCTGTGAAGAGGCTTACAAGAAGCTCCGGGCAAGGTGCAGAAGAGTTTAAAAATGAGGTTCAAGTTATAGCTAAGCTTCAACACAGAAATCTAGTGAGGTTACTAGGATTTTGTTTGGAAGATGAAGAGAAGATACTTATCTATGAGTATGTGCCAAACAAGAGTCTAGATTACTTTTTATTTGTGATGAACGCGAACGAATCCAGTGATGAACGCGAACGAATCAGTGATGAATGCGAACGAATCAGTGATGAAAAATCAGTGATGGATTCAGAATGGTTTTAG 657 0.3942 MRIVAFLGCCCFQSWVAVAFSLGLLLLSVLGCCCFQSWVAVAFSLGLLLLSVLGCCCFLYRKERKNQHDILKESFGNDITSLESLQFELATIEAATNRFGVENRIGKGGFGEVYKGILSDGQEIAVKRLTRSSGQGAEEFKNEVQVIAKLQHRNLVRLLGFCLEDEEKILIYEYVPNKSLDYFLFVMNANESSDERERISDECERISDEKSVMDSEWF 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00041 218 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 45 187 - -
Car03g00041 218 Gene3D Phosphorylase Kinase; domain 1 59 174 - -
Car03g00041 218 ProSitePatterns Protein kinases ATP-binding region signature. 105 127 IPR017441 GO:0005524
Car03g00041 218 ProSiteProfiles Protein kinase domain profile. 99 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00041 218 SUPERFAMILY Protein kinase-like (PK-like) 76 189 IPR011009 -
Car03g00041 218 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Car03g00041 218 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 45 187 - -
Car03g00041 218 Coils Coil 189 209 - -
Car03g00041 218 Pfam Protein tyrosine and serine/threonine kinase 102 187 IPR001245 GO:0004672|GO:0006468
Car03g00041 218 SMART tyrkin_6 99 218 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00041 Car-Chr3 956153 957844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00041 39 201 Receptor kinase-like Gene Family AT4G05200 54.878 1.02e-51 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car03g00041 PK_Tyr_Ser-Thr 6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00041 - - mtr:MTR_1g105585 234.572