Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00024 ATGCCGGTGCTTCGTAGCGGACGGCGAAGTCGTCGTGCTCCGGTAGGCCGTAAAATCTCCGAACCGGCGGACAAATACGTGAAGACTCGGGCGGCGAAGAAAAAAGAGCAGAAGAAAAAGGTTATCGAGATATCTGAGTCTGACAACGGTCATCGAGATATCGCGGCGGCGGCGAAGAAAGAGGGAGAAGAAATTGAAGGAACGATGGGTGATGAAAGTGGTGGTTTGAGTGCTAATAAAGGTGTTGCTCAAGAGGATGAGGGAAATACTACTCCTTTTCCTGAGAGGGTTCAAGTAGGAGGTTCGCCTGTGTACAAAGTGGAGAGGAAACTTGGCAAAGGTGGGTTTGGACAGGTTTTCGTTGGTCGTCGAGTTACTGGTGGTAATGACCGCCTTAATGGCCCCGGTGCCACCGAGGTGGCTTTGAAATTTGAACATAGAAACAGTAAAGGCTGTAACTATGGCCCTCCTTATGAGTGGCAAGTGTACAACACCCTTGGTGGAAGTCATGGAATACCTAAAGTACATTATAAAGGAAGGCAAGGAGAATATTACGTGATGGTTATGGACATGCTTGGTCCAAGCTTGTGGGATGTATGGAATTCCTCAGGCCAGGCGATGTCTGCAGAAATGGTTGCATGTATTGCTGTTGAGTCATTATCGATCTTGGACAAGATGCACTCAAGGGGATATGTCCATGGAGATGTAAAGCCAGAGAACTTTTTACTTGGTCAGCCAGGTACAGCACAAGAGAAGAAATTGTTTCTTGTTGACCTCGGGTTAGCAACTAAGTGGAGAGATACCTCCAATGGGCTGCATGTTGAATATGATCAGCGTCCTGATATGTTCAGAGGAACTGTTCGATATGCGAGTGTTCATGCTCATTTGGGAAGAACTGCTAGTAGAAGGGATGATCTTGAATCTCTTGCATATACACTCATTTTTCTTCATAAAGGCCGGTTACCATGGCAAGGTTATCAGGGAGATAATAAGTCGTATCTTGTTTGCAAAAAGAAGATGGGAACATCTCCTGAGATGCTATGCTGCTTCTGCCCTGCTCCTTTCAGACATTTTCTTGAGTTTGTAGTGAACATGAAATTCGACGAAGAACCTAACTATTCCAAACTAATATCCCTGTTTGACAGTATGCTTGGACCAAATCCTGCATTACGGCCAATAAATACTGAAGGTGCTCAAAAGGTTGGGCAAAAGAGGGGTAGATTAACTATTGAGGAAGAAGATGATTCACAGCCCAAGAAGAAGGTTCGTTTGGGGGTTCCTGCTACACAATGGATATCAATTTACAATGCGAGAATGCCAATGAAGCAAAGGTATCATTACAATGTAGCGGATGGAAGATTAGCGCAACATGTAGAGCGAGGGATTGCAGACGGCCTTCTTATTAGTTGTGTGGCTTCTTGTTCGAATCTCTGGGCACTTATCATGGATGCTGGAACTGGTTTTACAAATCAAGTTTACAAGTTGTCACCTTTTTTCTTACACAAGGAATGGATCATGGAGCAGTGGGAGAAGAACTATTACATTACTTCGATAGCCGGGGTTACTAATGGGAGCTCTCTTGTGGTGATGTCCAAAGGCACACAGTATACACAACAATCATACAAAGTAAGCGATTCTTTCCCATTCAAATGGATAAACAAGAAGTGGAGAGAAGGATTTCATGTGACTTCAATGGCCACTGCTGGAAGTCGTTGGGGTGTTGTTATGTCACGGAATGCTGGATTCAGTGATCAGGTCGTTGAACTTGATTTTCTCTACCCAAGCGAAGGAATCCATAGACGATGGGATAATGGTTACCGGATCACAGCAACTGCTGCTACATGGGATCAATCTGCTCTTATATTAAGCAAACCAAGGCGCAGGCCAGCTGATGAAACTCAGGAAACTCTGCGGACTTCTCAATTTCCAAGCACACATGTTAAGGAAAAATGGTCAAAAAACCTTTATCTTGCTTGTTTGTGCTATGGACGTACGGTATGCTGA 2004 0.4456 MPVLRSGRRSRRAPVGRKISEPADKYVKTRAAKKKEQKKKVIEISESDNGHRDIAAAAKKEGEEIEGTMGDESGGLSANKGVAQEDEGNTTPFPERVQVGGSPVYKVERKLGKGGFGQVFVGRRVTGGNDRLNGPGATEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDMLGPSLWDVWNSSGQAMSAEMVACIAVESLSILDKMHSRGYVHGDVKPENFLLGQPGTAQEKKLFLVDLGLATKWRDTSNGLHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKSYLVCKKKMGTSPEMLCCFCPAPFRHFLEFVVNMKFDEEPNYSKLISLFDSMLGPNPALRPINTEGAQKVGQKRGRLTIEEEDDSQPKKKVRLGVPATQWISIYNARMPMKQRYHYNVADGRLAQHVERGIADGLLISCVASCSNLWALIMDAGTGFTNQVYKLSPFFLHKEWIMEQWEKNYYITSIAGVTNGSSLVVMSKGTQYTQQSYKVSDSFPFKWINKKWREGFHVTSMATAGSRWGVVMSRNAGFSDQVVELDFLYPSEGIHRRWDNGYRITATAATWDQSALILSKPRRRPADETQETLRTSQFPSTHVKEKWSKNLYLACLCYGRTVC 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00024 667 MobiDBLite consensus disorder prediction 1 48 - -
Car03g00024 667 SUPERFAMILY Protein kinase-like (PK-like) 105 389 IPR011009 -
Car03g00024 667 SMART serkin_6 105 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00024 667 ProSiteProfiles Protein kinase domain profile. 105 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00024 667 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 63 637 - -
Car03g00024 667 Gene3D Transferase(Phosphotransferase) domain 1 78 424 - -
Car03g00024 667 PANTHER CASEIN KINASE-RELATED 63 637 - -
Car03g00024 667 CDD STKc_CK1 105 380 - -
Car03g00024 667 Pfam Protein kinase domain 105 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00024 667 ProSitePatterns Protein kinases ATP-binding region signature. 111 143 IPR017441 GO:0005524
Car03g00024 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Car03g00024 667 MobiDBLite consensus disorder prediction 14 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00024 Car-Chr3 606302 613865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00024 181 377 MAP Kinase Kinase Kinase Kinase AT1G53165 22.222 6.85e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Car03g00024 Pkinase 2.4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00024 - - gmx:100819969 1203.73