Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00021 ATGGCTTCATCTTTGGAAGAGCTTCTTGCAGAGGAAGGTTTCAAAGGAAGAAGAAGTGTACAAAGGTCAAGATCTTCTTTCCACCATGGTGCTTCAAGTGATCCACTTCACTCCTTAGAAGACAGACTTTGTGTATCATCAAGTGAAAGAATCAAAACAAATAAATCTAATAAGTCTAAAACAGCCTCAAGATATCAGATTAACAATACAACCAATAACAACGTGAGATCAAAGGCTAACATTTTCATAGGAAACAAGATAAATCATGAATTGTCGAAGAATGACGAAACTGAGAAGAACAAGTCTTATAATAATTCATCAGAGTACATGTCAATGCCAAGGTATGAAGATATTGATAGTGATGTTGAAAATGTTACAAGAGGCAAAGACAAGTATTTCAATGAAGTTGTGGAGAAGCCAATCAAGGATTCATATATGCTTAAAAACTTGAGTGAAAATAGAAAGAATATAAAACACAAGGAAAAATCAGACACTATATCTAATAGTAATACTAACAGCAAAAAAAACCATGATGCTATTATGCAGTTGCAACAAGATGCTTCTTCAAGTCTTGCTCTTGATGAAGTTGCTGTTAAAGCACTAGTTTCCATTTTGAATAGATACATAGAAAGTTTTCTAAAGGACGAAGATTTTCGGGCTGCCATGCGCCACGATTGTTTCTCCTCCTTGAATTTCATTCAATTGGAGGAAGAAAATAGTTCTGAGACCAAAGTGATTACAAGTCTTGAACAAGCAATTGAGTGCATAGAACAAAAAGCTGATTCTGAGGAACCTGTATCTGCGAAAAATCTGAAAAGAGCAACAATGCAGCTTAGCATTATAACTGGTTTGAGTTTGAATGATCTTAAGTACGATTTTACGTGCGGGATACCTAATTTCAAGTTGTCGGCTTGCGCTCATCTTTACCTCAGTGTTGTATATTTGATGCAAAAGAAAAAGAAAGTTTCGGCGAAGCATCTGTTGCAAGTCTTCTGCGATTCGCCTTTTCAGGCGCGGACGATATTGTTGCCTGAACTTTGGGAGCATTTATTTTATCCACAACTTTGTCATTTGAAGGAATGGTATAACAACAAGGAAGCTGAAATTGTTGATACAAGAAAGCTAAAATTTCTTCAAAAAGTGTATAATGAACATTTGGATTCAGGAACTCAAATCTTTGCTGTATATTACAAAGATTGGCTTATTGAAGGAGTTGAAACTCCAACTATTCCTTCTATTGGATTTCCATCATTTTCTGTTACTAGTCCTTCTTCAGAATCTTCTGAAACATTTTCACCACAGGCAATGGTAAGCAAGAAACTATATGATTCTTTCTTTGGTAAATATAGTAAACCTGAAATCTatgaagttgatgatgatgatgatggtgataaggatgaAGGTAGCTTTGAAAATTGCGAGAGAGGATCTTATGGTTCGACCTTCGTTAAAAAGACGTTAATATATGAATCCGAAACTGTTAAATTTAGTGATCAAAGTACTGAAGATTTCACTCCAAGTGTATCAGTTCATGCATTCTATCCTCAGAAAGGAACATCTAGGATAGCTGCAGAAGAATGGAAAGAGAGGAATTCCATAAATGCCCCTCGAAAGTATTTCTCCTTAGAAGCTAATTTAAACAGTCACATAGGCGATGCTCTACCACATGAAAAAGCAAATGAAATTTCTCTCAGAAAGCCAAATAAGATAAGCTCTATTCTTGAAGGATCATATTTTCCAAGCATACCACAGGAATTCATTTGTCCTCTCACTAAAAATATCTTTGAAGAACCAGTCACACTAGAGTCTGGTCAAACTTATGAAAGAAAATCCATCAAGGCATGGTTTGAAAAGGGAAACAAAACATGTCCAGTAACAGAAAACACTTTAGAATGTGTAGTCATTCCATGTACCAACCTTCTTTTGAAGCGTTTGATCGATAACTGGAAGTCAGAAGATTTCAACCGCCTTCTTGATTTCGCCTCACAAACAGTGGAATATTCAAAGGAACTTAAGTTGAAAAAGAGAGATGAGGCTGCGGTGTTCATGTTACAAGGTCTTTTCTCATCCTTGAAAGATGGTGACAAATCAACTTATGCTAAGCATCTCATCTCTTTAGGAGTTCTTTCATTTCTCTTTAGGAGATTTGAATTTGGAAATCTGGAAGAAAAATCACATGTGCTGGAGCTCTTGTTAAATTGTATTGAAGAAGACTCTAGTTGCATATATAAGATAGCAAGAAGTGTCAATAGAAAATGTTTTCTTGAGCTTCTTCACAGCAAGGAGGTTACCCCAACAACAAATGCAATACTATTACTTACTGAACTTTTGTCAATTAAGAGGAGAAAGGATTTTAGTTCTTTCATAAGTGGCTTGATGGGTGAAAATGTATTTAGTACAATGCATATTCTGCTCATGTATCTCAAGAATTCTTCTCCAATTGAAAAGCCTCTCATTGCTGTCCTCTTATTACACTTTGATCTACTGGTTGAGCAGCCTCAAAAGTTTAGAATATATAGAGAAATGGCTGTGAATGCCATTGCAGAGGCACTTGATGGCAGCTTAAATGACGAAAAGATCCGAAAGAAGTGTTGCAGAGCTCTTTTAATCTTGTGTGGCCATTTTTCTTCCACTGGAATGATAACAACAAGGACTAGCATCTTAAAGCAAGCAGGTTATAATAATGGTAGCTCAGAATTGAAATATCCTGGCCATGATGATGATGAGGATCAACAGTTAGATATAACCATTTCACTGGAAGATGAAGAAGAAAGAGATGAAGAGTTCCTAATGAAGTTGTTAGAATCATTGATTGGGGATGGAGAAAGTCCATTTTTGAAGACCATATCTAGATGTTTAGATTGTAGACATGTAGATTTGGTGAGGGCTTGTCTAATAACTGTAACATGGTTGAGTTCATCACTTTCTAAACTATTTCATGCTGGATTGCACCTTCCTGCCTTCTTAGCCATCATCTCTCAGCTGAAAGGAATTCTGCAAAATGGAGAACTTGAGCTCAAGACTCTTGCTTCTATGTCCTTGCTTAACTTCAGTAAAATATCAGAATACAGAACACTTTTGAAGATTATGGCAGAAGATATTGCTCCCCTTCTTCATGGACTAGTTGATGTAATATGGACTGCAAAGAAACTGCATGCCATTGTGTGTAGGGAGAATCTTTAG 3183 0.3582 MASSLEELLAEEGFKGRRSVQRSRSSFHHGASSDPLHSLEDRLCVSSSERIKTNKSNKSKTASRYQINNTTNNNVRSKANIFIGNKINHELSKNDETEKNKSYNNSSEYMSMPRYEDIDSDVENVTRGKDKYFNEVVEKPIKDSYMLKNLSENRKNIKHKEKSDTISNSNTNSKKNHDAIMQLQQDASSSLALDEVAVKALVSILNRYIESFLKDEDFRAAMRHDCFSSLNFIQLEEENSSETKVITSLEQAIECIEQKADSEEPVSAKNLKRATMQLSIITGLSLNDLKYDFTCGIPNFKLSACAHLYLSVVYLMQKKKKVSAKHLLQVFCDSPFQARTILLPELWEHLFYPQLCHLKEWYNNKEAEIVDTRKLKFLQKVYNEHLDSGTQIFAVYYKDWLIEGVETPTIPSIGFPSFSVTSPSSESSETFSPQAMVSKKLYDSFFGKYSKPEIYEVDDDDDGDKDEGSFENCERGSYGSTFVKKTLIYESETVKFSDQSTEDFTPSVSVHAFYPQKGTSRIAAEEWKERNSINAPRKYFSLEANLNSHIGDALPHEKANEISLRKPNKISSILEGSYFPSIPQEFICPLTKNIFEEPVTLESGQTYERKSIKAWFEKGNKTCPVTENTLECVVIPCTNLLLKRLIDNWKSEDFNRLLDFASQTVEYSKELKLKKRDEAAVFMLQGLFSSLKDGDKSTYAKHLISLGVLSFLFRRFEFGNLEEKSHVLELLLNCIEEDSSCIYKIARSVNRKCFLELLHSKEVTPTTNAILLLTELLSIKRRKDFSSFISGLMGENVFSTMHILLMYLKNSSPIEKPLIAVLLLHFDLLVEQPQKFRIYREMAVNAIAEALDGSLNDEKIRKKCCRALLILCGHFSSTGMITTRTSILKQAGYNNGSSELKYPGHDDDEDQQLDITISLEDEEERDEEFLMKLLESLIGDGESPFLKTISRCLDCRHVDLVRACLITVTWLSSSLSKLFHAGLHLPAFLAIISQLKGILQNGELELKTLASMSLLNFSKISEYRTLLKIMAEDIAPLLHGLVDVIWTAKKLHAIVCRENL 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00021 1060 MobiDBLite consensus disorder prediction 13 36 - -
Car03g00021 1060 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 581 655 IPR013083 -
Car03g00021 1060 Gene3D - 678 1051 IPR011989 -
Car03g00021 1060 MobiDBLite consensus disorder prediction 154 175 - -
Car03g00021 1060 SMART Ubox_2 585 649 IPR003613 GO:0004842|GO:0016567
Car03g00021 1060 CDD RING-Ubox_PUB 586 626 IPR045210 -
Car03g00021 1060 PANTHER OS04G0584500 PROTEIN 1 1058 - -
Car03g00021 1060 Pfam U-box domain 582 652 IPR003613 GO:0004842|GO:0016567
Car03g00021 1060 PANTHER OS04G0584500 PROTEIN 1 1058 - -
Car03g00021 1060 SUPERFAMILY RING/U-box 577 652 - -
Car03g00021 1060 SUPERFAMILY ARM repeat 707 1039 IPR016024 -
Car03g00021 1060 ProSiteProfiles U-box domain profile. 581 656 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00021 Car-Chr3 527572 534115 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00021 578 659 U-box Gene Family AT5G09800 42.169 1.53e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00021 - - gmx:100820501 1337.78