Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00018 ATGGATAGCAAGAGCCATATGAAGGGAAAAGTGAACAAGAAATTAGGCATGATGATCACAAAAACATGGGAGAGATGCAAGTCCATAGGAAGAGGAGGGTATAAGAGTAAATATTCATCATCAACAATAAATCCAACAGCAACAAGAAGAAGTAAATCATGGCCTATTCGTCGAGGGGACGAAAAGGGTGAAAAGAAATTAGGAAGTGTTGTGGTCCCACAAGGATATTTCTGTGTGTATGTGGGACCACAGATGCAAAAGTTTGTTATAAAAACAGAATATTGTAACCACCCTCTGTTCAAGATTTTACTTGAAGAAGCTGAAACAGAATACGGTTATAGTAGCCAAGGACCTTTGGCTCTACCTTGTAATGTTGATGTGTTTTACAAGGTTTTGATGGAAATGGACAGTGAAGTCATGAATTCTCGTCAAGGTTGTGCTTTTCGTGGAAATTACCGTTCTCGTTCTTCTTATCATCTTCTTTCCCCTTCAAGAATCCTTGCCTTAAACAACTCCTGA 519 0.3892 MDSKSHMKGKVNKKLGMMITKTWERCKSIGRGGYKSKYSSSTINPTATRRSKSWPIRRGDEKGEKKLGSVVVPQGYFCVYVGPQMQKFVIKTEYCNHPLFKILLEEAETEYGYSSQGPLALPCNVDVFYKVLMEMDSEVMNSRQGCAFRGNYRSRSSYHLLSPSRILALNNS 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00018 172 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 17 144 IPR003676 GO:0009733
Car03g00018 172 Pfam Auxin responsive protein 53 132 IPR003676 GO:0009733
Car03g00018 172 PANTHER SMALL AUXIN-UP RNA-RELATED 17 144 - -
Car03g00018 172 MobiDBLite consensus disorder prediction 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00018 Car-Chr3 468076 469052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00018 72 132 Calmodulin-binding Proteins AT3G43120 50.820 3.36e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00018 K14488 - gmx:100777217 190.274