Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00015 ATGAATTTAGTGAAGAAGAAGAATGGAGAAGTGAAATTACCACCAGGATTCCGTTTTCATCCAACAGATGAAGAGCTTGTTGTTCAATACTTGAAGCGTAAGGTCTTCTCTTACCCTTTACCCGCTTCCATCATTCCTGAACTTCATCATCTTTCCAACTCTGATCCTTGGGATTTACCAGGTGATTTGGGAGAAGAGAGGTACTTTTTCAGCACTAAAGAAGCCAAATATCCAAATGGAAACAGATCCAACAGAGCAACTAACTCTGGTTACTGGAAGGCAACAGGGTTAGACAAACAAATTCTAAATTCAAATTCAAATGTTGTTGTTGGTATGAAAAAGACTCTTGTTTTCTACAAAGGCAAACCCCCTCACGGTTCAAGAACTGATTGGATCATGCATGAATATCGCCTCACTAAtcattcttcctctctgAAACAAAATTGGGTTGTGTGTCGCATATTTCTGAAGAAGAGAGGTGGTGCTAAAAATggaggaggaagaggaggagAGAACACAGTAACAGTGAGAGAGAAACCCAGCAAAGTAAAGaactcaaactcaaactcaaactcaaaGGTGGTGGTTTTCTATGACTTCTTGTCATCCCCAATTTTATCAGCAACAAGTGGAATAACAGAAGAACACaatgaaaatgaaaatgaaaatgaacatgaaGACAGCAGTAGCTCATTTCCTTCGTTAACAAATAATAATTAA 720 0.3389 MNLVKKKNGEVKLPPGFRFHPTDEELVVQYLKRKVFSYPLPASIIPELHHLSNSDPWDLPGDLGEERYFFSTKEAKYPNGNRSNRATNSGYWKATGLDKQILNSNSNVVVGMKKTLVFYKGKPPHGSRTDWIMHEYRLTNHSSSLKQNWVVCRIFLKKRGGAKNGGGRGGENTVTVREKPSKVKNSNSNSNSKVVVFYDFLSSPILSATSGITEEHNENENENEHEDSSSSFPSLTNNN 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00015 239 MobiDBLite consensus disorder prediction 213 239 - -
Car03g00015 239 ProSiteProfiles NAC domain profile. 13 157 IPR003441 GO:0003677|GO:0006355
Car03g00015 239 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 236 - -
Car03g00015 239 Pfam No apical meristem (NAM) protein 14 138 IPR003441 GO:0003677|GO:0006355
Car03g00015 239 MobiDBLite consensus disorder prediction 161 188 - -
Car03g00015 239 PANTHER NAC DOMAIN-CONTAINING PROTEIN 83-LIKE 4 236 - -
Car03g00015 239 Gene3D NAC domain 22 161 IPR036093 GO:0003677|GO:0006355
Car03g00015 239 SUPERFAMILY NAC domain 9 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00015 Car-Chr3 400857 402569 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00015 7 164 NAC Transcription Factor Family AT5G13180 75.155 1.03e-86 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car03g00015 NAM 1.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00015 - - gmx:100170709 274.633