Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00006 ATGTCAGAAATATTAGATAATTCATTTGCTTTTAGCACCCCCAGGTTGGTTTTCAAGAAGGTTTTGGCCCAATCTCAAAGTGAAGGGGATGGAATTGTTGTTAGAAAAGGCATTGGAAGTAGCGAGCTGAAGAATTTGGATCCGTTTGTATTGTTGTATCACTTCTCAGTGTCTCCTCCTGGAGGATTTCAAGATCATCCACACAGAGGTTTTTTTTTTTTAAATTTTGTTCTCCTAATTCCTGGTGGTATAACTCACCAAGATTTTGCTGGCCACAAGGGTACAATAAGAGCTGGTGATATTCAGTGGATGACTGTAGGCAGAGGAATTATCCACTCTGAAATGCCTGCAGAAGCAAACAACAATGCATTGCAACTTTGGATCAATTTATCAGCCAATGACAAAATGATTGAGCCAAAATATAAAGAAGTACCAAGTGAAAAGATAGTAACAGCAGAAAAAGAGGGTGTTGAAGTGAAAGTGATAGCAGGAAAAGCAATGGGAGTGGATTCAGCAGTCTACACAAGAACACCAATAATGTTCCTTGATTTCTCAATGATACCAGGAACTGAGCTGCATCAGAGTATTCCTGAGTCATGGAATTCTTTTGCATATATAATTGAAGGGGAAGGTGTTTTTGGTTCACAAAATTCATCACCAATTGTGGCTCATCATGTCATTGTTTTCACTCAAGGTGATGGCCTTAGTGTTTGGAATAAATCTTCAAAGCCTTTGAGGTTTTTGTTGATTGGAGGACAACCATTGAATGAGCCAATTGCTCAACAAGGACCTTTTGTCATGAATACACAATCTGAAATTGATCAAACTATTCAAGACTATCAGAATCGCACCAATGGTTTTGAGATGAGGCTAAATTGCATATCTCAATAG 891 0.3838 MSEILDNSFAFSTPRLVFKKVLAQSQSEGDGIVVRKGIGSSELKNLDPFVLLYHFSVSPPGGFQDHPHRGFFFLNFVLLIPGGITHQDFAGHKGTIRAGDIQWMTVGRGIIHSEMPAEANNNALQLWINLSANDKMIEPKYKEVPSEKIVTAEKEGVEVKVIAGKAMGVDSAVYTRTPIMFLDFSMIPGTELHQSIPESWNSFAYIIEGEGVFGSQNSSPIVAHHVIVFTQGDGLSVWNKSSKPLRFLLIGGQPLNEPIAQQGPFVMNTQSEIDQTIQDYQNRTNGFEMRLNCISQ 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00006 296 SUPERFAMILY RmlC-like cupins 15 289 IPR011051 -
Car03g00006 296 PIRSF Pirin 13 292 IPR012093 -
Car03g00006 296 Pfam Pirin 36 128 IPR003829 -
Car03g00006 296 PANTHER PIRIN-LIKE PROTEIN 9 292 - -
Car03g00006 296 PANTHER PIRIN-RELATED 9 292 IPR012093 -
Car03g00006 296 CDD cupin_pirin_N 34 130 - -
Car03g00006 296 CDD cupin_pirin_C 178 254 - -
Car03g00006 296 Pfam Pirin C-terminal cupin domain 181 285 IPR008778 -
Car03g00006 296 Gene3D Jelly Rolls 28 282 IPR014710 -
Car03g00006 296 Gene3D Jelly Rolls 150 255 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00006 Car-Chr3 232957 234821 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00006 12 289 Calmodulin-binding Proteins AT3G59220 64.286 4.66e-127 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00006 K06911 - gmx:100802145 446.817