Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02257 ATGGATAACGATAACGATGTTGTAGAATTTGATATTGAGATTgacgaggaggaagaggaagaggatgatgatgaattggaattggatttggatatggatttggGAGAAAGCAGCGGTGCAGTGTATTTCCCAGAGGCGGGGGATCTGgaaccttcggagggaatggaattcgagtctgaagaggctgcaaagggcttctataattcatatgctcgtcgtgttgggtttagtactcgcgtgagttcatctcgtcgttcaagaagagacggagctatcattcagaggcaattcgtttgtgcaaaggaagggtttcgcaacttgaatgagaaaagaaccaaagatagagagatcaagcgtccacgtatagttaccagagttggatgcaaggcctccttatctgtcaaaatgcaagattcttctggcaaatggatcgtctctggtttcgtcagagaacacaatcacgaacttgttccacccgatcaagttcactgtcttcgctcccacaggcaaatttctggatctgcaaagaccctcatcgacactctacaggcagctggtatgggtcctcgtcgaattatgtctgcactcatcaaagagtatggtggtatcagcaaagttggctttaccgaggttgactgtaggaattacatgaggaataatcgccacagaagtagtttacacggtgacattcaacttgttcttgactatttgagacaaatgcatgcccaaaaccctaatttcttctatgctgttcaaggtgatcacgaccatgatgacatcaccaatcttttctgggctgaccccaaagcaaggttgaattacactttctttggagataccgtcacttttgacactacttaccgctctaataggtatcgattaccctttgctccctttactggtgttaaccatcatggtcaacctgttctctttggttgtgcttttctaatcaatgaatcccaagcttcatttgtctggcttttcaagacatggctcatggccatgtctggacgcccacctctctcaataacaaccgaccatgattctgtaattcagtccgccataatacaagtattccccgagactcgccaccgttactgcaagtggcacatcttcaagcaatgccaggagaagttgtctcacattttcctcaagtttcctaattttgaagccgagtttcacaaatgtgttaacttgactgaatcaattgacgagtttgagtcttcctggtccatacttgtagatagatatgatctcagggacaatgaatggcttcaagcaatacattctgcttccagacagtgggtacctgtatatttgcgagacacgttctttgcagaaatgtccatcactcagcgaagtgatagcatgaactcttactttgatggctatgtgaatgcttcaaccagtttaaatcagttcttaaagctttatgagaaagcgcttgaaagtcgcaatgagaaagaagtaagagcagattatgacacaatgaatactttgccaatattgaggaccccatctcctatggagaagcaagcatccaggctttacacaagaaaaattttcacgaggttccaagaggagttggttggcacactaacattcatggcatctaaagccgaggatgatggcgaggtcattacttatcatgtagctaaatttggagaagatcataaaatatacaatgttaaattcaatgttttggagatgaaagcgacttgcagctgccaaatgtttgagttttcaggccttctttgcagacatattctggcagtctttagagttaccaatgtcctcactcttccatctcattatatactcaaacgttggacaagaaacgccaagagcaatgtaatattggaagaacatTCTTGTGATGTATATACTTACTATTTGGAATCTCACACGGTTAGATATAATACTCTCCGACACGAGGCCTTTAAATTTGTTGATAAAGGTGCAAGCTCCCCTGAAACTTATGATGTTGCAAAGGATGCTTTACAAGAAGCTGCTAAAAGAGTTGCACAGGTAATGCGAAATGAGGGGAGAATTCCCATCAGCAATGGAAAGGTTAGGAGTCACTTGCTGAATGATGAAAGTCGCGCTAATTACACAAGTGGCTGTCAAGAACAAAGCTTGGGCCAGCATTCGAACAAGGATGATATGGATAAGCATATCACAAAACTTATGAATGAGCTTGCGTGTGCAAATCGAAAGTGTGAAATTTACCGGTCCAACCTGCTCTCTGTTTTGAAAGCTGTTGAGGATCACAAGTTAGAGTTGTCGGTAAAGGTGGAAAACATTAAGATAAGCATGAAAGACGACTTCTGA 2331 0.097 MDNDNDVVEFDIEIDEEEEEEDDDELELDLDMDLGESSGAVYFPEAGDLEPSEGMEFESEEAAKGFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRIVTRVGCKASLSVKMQDSSGKWIVSGFVREHNHELVPPDQVHCLRSHRQISGSAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRHRSSLHGDIQLVLDYLRQMHAQNPNFFYAVQGDHDHDDITNLFWADPKARLNYTFFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFLINESQASFVWLFKTWLMAMSGRPPLSITTDHDSVIQSAIIQVFPETRHRYCKWHIFKQCQEKLSHIFLKFPNFEAEFHKCVNLTESIDEFESSWSILVDRYDLRDNEWLQAIHSASRQWVPVYLRDTFFAEMSITQRSDSMNSYFDGYVNASTSLNQFLKLYEKALESRNEKEVRADYDTMNTLPILRTPSPMEKQASRLYTRKIFTRFQEELVGTLTFMASKAEDDGEVITYHVAKFGEDHKIYNVKFNVLEMKATCSCQMFEFSGLLCRHILAVFRVTNVLTLPSHYILKRWTRNAKSNVILEEHSCDVYTYYLESHTVRYNTLRHEAFKFVDKGASSPETYDVAKDALQEAAKRVAQVMRNEGRIPISNGKVRSHLLNDESRANYTSGCQEQSLGQHSNKDDMDKHITKLMNELACANRKCEIYRSNLLSVLKAVEDHKLELSVKVENIKISMKDDF 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02257 776 ProSiteProfiles Zinc finger SWIM-type profile. 561 597 IPR007527 GO:0008270
Car02g02257 776 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 31 749 - -
Car02g02257 776 SMART 26again6 572 599 IPR006564 GO:0008270
Car02g02257 776 MobiDBLite consensus disorder prediction 1 26 - -
Car02g02257 776 Coils Coil 719 746 - -
Car02g02257 776 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 31 749 IPR031052 GO:0006355
Car02g02257 776 Pfam SWIM zinc finger 549 595 IPR007527 GO:0008270
Car02g02257 776 Pfam FAR1 DNA-binding domain 66 158 IPR004330 -
Car02g02257 776 Pfam MULE transposase domain 281 373 IPR018289 -
Car02g02257 776 Coils Coil 660 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02257 Car-Chr2 52601303 52610876 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Car02g02257 MULE 2.2e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02257 - - gmx:100793442 1316.98