Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02251 ATGGGGATTTGCTTCAGTTCCGATCAACCTAACGAcccaaccccaaccccaaccgcaacagcaaccGTTACACCTGGGACATCTCATTCCGATACAACTAGTGGCAGCTACAGTAGTAATaccaccaccaccaccactactaccaGTAGTTCTTCTACAAGTAGTGGTGGGAACAGTATCAATTCCTCCCTAAGTAGCTTCTCGGTGGGGTCGTCGATTGGATACGGCCAGATCTTAGCTACTTCTAATTTGAGGGTCTTCACTTTTGCGGAATTGAAGTCTGCTACGAAGAATTTCAGAGCTGATACACTGCTTGGTGAGGGAGGTTTTGGAAAAGTCTTCAGAGGATGGCTTGATTCAACTACCGTTGCAGTCAAAAAGTTGAATTCCGAAGGCTACCAAGGACTCGAGGAATGGCAGTCTGAAATACATTTTCTAGGACGGCTTTCTCATCCTAACCTCGTGAAGCTGTTGGGATACTGTTACGAGGGAACAGAGCTTCTTCTGGTCTATGAATACATGCAGAAGGGCAGTTTGGAAAATCATCTCTTTGGAAGGGGCGCTGCTGTTCAACCACTTCCTTGGGACCTCAGGCTTAAGATTGCAATTGGGGCTGCTTCTGGCCTTTCTTTCTTGCATACATCCGATAGAGAAATTATTTACAGAGACTTTAAGGCCTCCAATATATTGCTTGATGGGTCCTATAATGCAAAGATATCAGATTTTGGGCTAGCAAAGCTGGGTCCTTCAGCTAGTCAATCCCATTTGTCAACAGCGGTTATGGGCACACTTGGTTATGCAGCTCCTGAATACATGCAAACAGGGCATCTATATGTAAAGAGTGACGTGTATGGGTTTGGAGTTGTTTTGGTTGAGATTCTGACAGGCCTACGAGCAGTAGATGCCAACCGTCCAACCGGGTTTCACAATCTAACGGACTGGATCAAACCACACCTACAGGATAGAAGAAAACTGAAGAATGTTATGGATCGTCAATTGGGAGATAAATATCCAATTAAAGCTGCACTTCCTGTAGCTAAGCTTGCTTCAAAATGTCTAGCACCTGAGCCCAAAATGCGCCCATCCATGAAGGAAGTCTTGGAGGACTTGAAGGGTATTCAAGCTTCTACTAACAGAACCGTGGTGGTTAACCCCAATTAA 1161 0.4255 MGICFSSDQPNDPTPTPTATATVTPGTSHSDTTSGSYSSNTTTTTTTTSSSSTSSGGNSINSSLSSFSVGSSIGYGQILATSNLRVFTFAELKSATKNFRADTLLGEGGFGKVFRGWLDSTTVAVKKLNSEGYQGLEEWQSEIHFLGRLSHPNLVKLLGYCYEGTELLLVYEYMQKGSLENHLFGRGAAVQPLPWDLRLKIAIGAASGLSFLHTSDREIIYRDFKASNILLDGSYNAKISDFGLAKLGPSASQSHLSTAVMGTLGYAAPEYMQTGHLYVKSDVYGFGVVLVEILTGLRAVDANRPTGFHNLTDWIKPHLQDRRKLKNVMDRQLGDKYPIKAALPVAKLASKCLAPEPKMRPSMKEVLEDLKGIQASTNRTVVVNPN 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02251 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Car02g02251 386 ProSitePatterns Protein kinases ATP-binding region signature. 105 127 IPR017441 GO:0005524
Car02g02251 386 Gene3D Transferase(Phosphotransferase) domain 1 174 384 - -
Car02g02251 386 PANTHER SERINE/THREONINE-PROTEIN KINASE PIX13-RELATED 33 376 - -
Car02g02251 386 ProSiteProfiles Protein kinase domain profile. 99 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g02251 386 CDD STKc_IRAK 105 373 - -
Car02g02251 386 PANTHER OS01G0588500 PROTEIN-RELATED 33 376 - -
Car02g02251 386 Gene3D Phosphorylase Kinase; domain 1 73 173 - -
Car02g02251 386 Pfam Protein kinase domain 101 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g02251 386 MobiDBLite consensus disorder prediction 1 59 - -
Car02g02251 386 SUPERFAMILY Protein kinase-like (PK-like) 80 370 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02251 Car-Chr2 52549914 52552305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02251 76 374 Receptor kinase-like Gene Family AT4G02010 51.155 4.72e-98 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car02g02251 Pkinase 3.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02251 - - mtr:MTR_5g099130 549.666