Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02243 ATGGGTTGTTGCCAATCCTCGTTGTCAAGGTTGAGAGGAGGAGTTAGAGATGGAGataatactaataataatattaataataataataatCACCCTCTTAAGCTAAATGAAAaccacaaggaacaaccctaccaccaccacatcaaccaccaccGGAAAAACCACAATCTCAATCAAACTCAAATTGAAACCGGTAAAGACTCTTCGACGCTGGATCCTTCATCCTTCACTTTCTCAGAGTTTTCACTAACAGACCTTAAATCGGCGACGAACAATTTCAGCTCAGAGTATATCGTTTCGGAGAGTGGTGAAAAGGCACCGAACTTAGTTTACAAAGGTAAACTTCAGAATCAGAATCAGAAGCGTTGGATTGCTGTTAAGAAGTTCAGCAAAGCTGCTTGGCCGGATCCGAAACAATTCGTTGAAGAAGCTTCTGGTGTTGGTAAATTGCGTCATCCTAGGCTTgctaatttgatcggttattgctgtgatggtgatgagaggttactcgttgctgaattcatgcctaatgataccctcgCCAAACACCTCTTCCACTGGGAAAATCAGACCATTGAGTGGGCCATGCGCTTAAGAGTGGCTCTTTATATTGCACAAGCTTTGCATTATTGTACTTCTGAGGGTCGCCCTTTATACCATGATTTGAATGCTTATCGCGTTCTTTTCGATGAGGAAGGTGATCCGCGTCTGTCTTGTTTTGGTTTAATGAAGAACAGTAGGGATGGAAAAAGTTATAGCACAAACCTTGCTTATACACCTCCTGAATATTTAAGAAATGGAAGGGTCACCCCTGAAAGTGTCATTTACAGCTTTGGAACTGTTCTTCTCGACCTACTCAGTGGCAAGCACATCCCTCCCAGTCATGCACTTGATATGATACAGGGAAAAAACAACATGCTCTTGATGGATTCTCATTTGGAGGGAAAGTTTTCTACAGAAGAGGCAACAGTAGTTGTCAATCTTGCTTCTAAATGTTTGCAATATGAGCCGCGAGAGCGGCCTAATACAAAGGATTTGGTCACGACACTTTCCCCATTGCATACCAAACCTGATGTTCGTTCTCACATCATGCTTGGAATTCCAAAGCAAGAGGAAGCTCCATCAACCCCACAACGCCCTCTTTCAGCAATGGGTGAGGCTTGCTCAAGAATGGACCTCACTGCAATACATCAGATCTTGGTTGCAACACACTACAGAGATGATGAAGGGACTAATGAGTTGTCGTTCCAAGAGTGGACTCAACAGATGAGAGATATGCTGGAGGCAAGGAAGCGTGGGGACTATGCATTCCGTGACAAGGATTTTAAGACAGCCGTCGATAACTATTCCCAGTTCATTGATGTGGGAACGATGGTCTCGCCTACAGTTTTTGCAAGACGTAGTCTGTGCTATCTGTTATGTGATCAACCAGATCCTGCACTACGAGATGCAATGCAAGCACAGTGCGTTTATCCAGACTGGCCCACGGCTTTCTACATGCAGTCAGTTGCTCTTGCAAAGCTGGATATGCACAAGGATGCAGCTGACATGTTAAATGAAGCAACTGCATTGGAAGAGAAGAGGCAAAGAGGAGCGAGAGGATCATAG 1608 0.4036 MGCCQSSLSRLRGGVRDGDNTNNNINNNNNHPLKLNENHKEQPYHHHINHHRKNHNLNQTQIETGKDSSTLDPSSFTFSEFSLTDLKSATNNFSSEYIVSESGEKAPNLVYKGKLQNQNQKRWIAVKKFSKAAWPDPKQFVEEASGVGKLRHPRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVALYIAQALHYCTSEGRPLYHDLNAYRVLFDEEGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDMIQGKNNMLLMDSHLEGKFSTEEATVVVNLASKCLQYEPRERPNTKDLVTTLSPLHTKPDVRSHIMLGIPKQEEAPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAVDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMHKDAADMLNEATALEEKRQRGARGS 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02243 535 MobiDBLite consensus disorder prediction 1 37 - -
Car02g02243 535 Pfam Protein tyrosine and serine/threonine kinase 110 350 IPR001245 GO:0004672|GO:0006468
Car02g02243 535 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 533 IPR045845 GO:0004672|GO:0009742
Car02g02243 535 SUPERFAMILY Protein kinase-like (PK-like) 68 355 IPR011009 -
Car02g02243 535 MobiDBLite consensus disorder prediction 16 33 - -
Car02g02243 535 Gene3D Transferase(Phosphotransferase) domain 1 176 367 - -
Car02g02243 535 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 1 533 - -
Car02g02243 535 Gene3D Phosphorylase Kinase; domain 1 68 174 - -
Car02g02243 535 ProSiteProfiles Protein kinase domain profile. 96 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g02243 535 SUPERFAMILY TPR-like 427 528 IPR011990 GO:0005515
Car02g02243 535 Gene3D Tetratricopeptide repeat domain 424 533 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02243 Car-Chr2 52455445 52462686 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02243 16 358 Glycoside Hydrolase AT3G07070 33.152 2.30e-47 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Car02g02243 PK_Tyr_Ser-Thr 4.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02243 K14500 - gmx:100808907 918.687