Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02236 ATGGCTACACAAGCTCTAGTGTCGTCATCATCTCTTACCTTCGCAGCTGAGGCTGTGAAGCAGAGTCTTGGAGCAAGATCACTCCCATCTTCAATTGGGTCTTCTAGAAAAGGTTCCTTTATTGTTAAGGCAGCTTCTCCTCCTGTTAAGAGTGGTGGAGCTGATAGGCCCTTGTGGTTTGCATCAAAGCAAAGTCTTTCTTATTTGGATGGCAGCCTTCCAGGTGACTATGGATTTGACCCTCTAGGACTTTCAGATCCTGAAGGAACAGGAGGGTTCATTGAGCCAAGATGGCTAGCATACGGCGAGATAATCAACGGCCGCTTCGCAATGTTGGGAGCACTTGGAGCTATAGCACCTGAAATTCTCGGCAAAGCTGGTTTGATCCCTGAGGAAACAGCACTTCCTTGGTTCCAAACCGGCGTGATTCCGCCAGCAGGAACATACAACTACTGGGCAGACAATTACACACTGTTTGTGTTGGAAATGGCACTCATGGGATTTGCAGAACACAGGAGACTCCAAGATTGGTACAACCCCGGGTCGATGGGAAAACAATACTTTTTAGGACTTGAGAAAGGTCTTGGTGGTTCTGGTGAACCAGCTTACCCTGGTGGACCTTTCTTTAACCCTCTTGGTTTTGGTAAGGATGAGAAATCCTTGAAGGATTTGAAGCTTAAGGAAGTTAAGAATGGGAGGTTAGCTATGTTGGCTATATTGGGTTACTTTATTCAAGGTCTTGTGACAGGAGTTGGACCATTCCAAAACCTCTTAGATCATCTTGCTGATCCTGTCAACAACAATGTCTTGACAAGTCTCAAGTTTCACTGA 831 0.4597 MATQALVSSSSLTFAAEAVKQSLGARSLPSSIGSSRKGSFIVKAASPPVKSGGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGALGAIAPEILGKAGLIPEETALPWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHLADPVNNNVLTSLKFH 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02236 276 Gene3D Chlorophyll a/b binding protein domain 58 275 - -
Car02g02236 276 SUPERFAMILY Chlorophyll a-b binding protein 55 272 - -
Car02g02236 276 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 275 - -
Car02g02236 276 Pfam Chlorophyll A-B binding protein 67 245 IPR022796 -
Car02g02236 276 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 275 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02236 Car-Chr2 52423264 52424684 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02236 1 276 Chloroplast and Mitochondria Gene Families AT1G61520 86.643 4.69e-167 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02236 K08909 - gmx:100784090 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02236 02 52423264 52424684 Car02g02236 02 52423264 52424684 ECH