Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02234 ATGAACATGGCAACCATTAATCCACAAAATGACAACCAAAGTGTTTTCTCAAGCTTGATCATTGACTCAGACCCTTTAAACTGGGATTCAGCTGCTAATTCACTAAAGGGTAGCCACTTTGAGGAAGTAAAACGCATGGTAGCAGAGTACAAGAAGCCAGTGATTTGTCTTGGTGGGGTAGAGACACTAACTATATCTCAGGTGGCTGCTGTTGCTAACAGCAACTCACATGTTAAGGTTGAACTCTCAGAGTCTGCAAGGGCTGGTGTTGAAGCTAGCTGCGAGTGGATCGCCGAAAACATTGACAAAGGCACTGCCATATATGGTGTTACTACTGGCTTTGGTGCTGCTTCACATAGAAGAACAGAACAAGGCTTTGCTCTTCAAAAGGAAATGGTTAGGTTTTTAAACTGTGCAATATTTGGCCGTGAAACTGAGTTGTCTCACACACTACCTCAGTCAGCAACAAGAGCGGCTATGCTTGTGAGGGTTAATACCCTTCTTCAAGGGTATTCAGGCATTAGATTTGAAATCTTAGAAGCTATCACCAAACTCCTCAACCATAATGTCACTCCAATCTTGCCATTACGTGGTACAATTACCGCTTCCGGTGATCTAATTCCTCTGTCCTACATAGCTGCATTGCTAACTGGTAGGCGGAACTCCCGAGCCGTTGGACCCTCAAAAGAGTCCCTTAATCCCAAGGAAGCTTTCCATTTAGCAGGTCTAAATTCTGGATTCTTTGAGTTGAAGCCTAAGGAAGGCCTTGCTCTTGTAAATGGAACAGCTGTTGGATCCGGTGTGGCTTCTACCGTACTTTTCGAGGCAAACATATTGGCTTTGTTGTCAGTAGTTCTATCAGCAGTTTTTACTGAAGTAATGCAAGGGAAGCCGGAATTTACGCATCATCTTATACATAAGCTGAAGTTCCATCCAGGTCAAATTGAAGCTGCTGCTATCATGGAACACATTTTAGATGGAAGCTCTTATATCAAAAACGCGAAACTGCAGCAAACAGATCCATTACAGAAGCCAAGAAAAGATCGTTATGCTCTTCAAACTTCTCCTCAGTGGCTTGGTCCACAAATTGAAGTTATCCGGTTTTCGACCAAGTCGATTGAAAGGGAGATAAATTCAGTCAATGACAATCCTCTGATTGATGTCAAAGGGAACAAGGCTCTGAATGGTGGTAATTTTCAAGGTACTCCTATTGGAGTCTCCATGGATAATGTTCGTTTAGCTATTGCTTCAATTGGAAAACTCGTGTTTGCGCAATTTACTGAGCTTGTCAATGACTTGTATAATAATGGGTTGCCATCAAATCTTTCTGTTGGTAGAAACCCAAGTCTTGATTATGGTTTTAAGGCCTCTGAAGTTGCCATGGCTGCTTATTGTTCTGAACTTCAATATTTAGCGAATCCTGTGACAAGCCATGTGCAAAGTGCTGAGCAACACAACCAAGATGTGAACTCTTTGGGTTTGATTTCAGCTTGGAAAACTGTTGAAGCCATTGAGATATTGAAGCTTATGTCTTCCACATATTTGGTTGCACTTTGCCAAGCTATTGACTTGAGGCACTTGGAAGAAATTTTTAAGAACACTATAAAAAATACTATAAGCAGAGTTGCAAAGAAAACATTAATCATAGAAGACAAAGAAGAAATTGATCCATTTAGATTTTGTGAGGAAAATTTGCTCAAAGTGGTTGATAGAGAATATGTATTCTCCTACATAGATGATCCCTCCAATGTTACGTATCCATTGATGCCGAAACTAAAGCAAGTACTCTATGAGCATGCACACATCAGTGCCATTAATGACAAGAATGCGAGCTTGTCAATATTTGAGAAGATTGGAGCTTTTGAGGATGAATTGAAGTCTCTATTGCCAAAGGAAGTTGAAAGTGCAAGGGTGGCATTTGAGAAGGGAAATCCAACAATTCCAAACAGAATTAAGGAATGTAGGTCATACCCACTCTACAAGTTTGTGAGGGAAGAACTAGGAATAGGATTGCTGACAGGGGAAAAGGATGTCTCACCAGATGAAGAATTTGAAAAAGTATTTACAGCAATGTGTCAAGCAAAGATTATTGATCCAGTTCTGGAATGTCTTGGTGATTGGAACGGAGTTCCCATCCCAATATAA 2145 0.4084 MNMATINPQNDNQSVFSSLIIDSDPLNWDSAANSLKGSHFEEVKRMVAEYKKPVICLGGVETLTISQVAAVANSNSHVKVELSESARAGVEASCEWIAENIDKGTAIYGVTTGFGAASHRRTEQGFALQKEMVRFLNCAIFGRETELSHTLPQSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNVTPILPLRGTITASGDLIPLSYIAALLTGRRNSRAVGPSKESLNPKEAFHLAGLNSGFFELKPKEGLALVNGTAVGSGVASTVLFEANILALLSVVLSAVFTEVMQGKPEFTHHLIHKLKFHPGQIEAAAIMEHILDGSSYIKNAKLQQTDPLQKPRKDRYALQTSPQWLGPQIEVIRFSTKSIEREINSVNDNPLIDVKGNKALNGGNFQGTPIGVSMDNVRLAIASIGKLVFAQFTELVNDLYNNGLPSNLSVGRNPSLDYGFKASEVAMAAYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISAWKTVEAIEILKLMSSTYLVALCQAIDLRHLEEIFKNTIKNTISRVAKKTLIIEDKEEIDPFRFCEENLLKVVDREYVFSYIDDPSNVTYPLMPKLKQVLYEHAHISAINDKNASLSIFEKIGAFEDELKSLLPKEVESARVAFEKGNPTIPNRIKECRSYPLYKFVREELGIGLLTGEKDVSPDEEFEKVFTAMCQAKIIDPVLECLGDWNGVPIPI 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02234 714 PANTHER HISTIDINE AMMONIA-LYASE 3 714 IPR001106 -
Car02g02234 714 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 24 704 IPR005922 GO:0005737|GO:0006559|GO:0016841
Car02g02234 714 PANTHER PHENYLALANINE AMMONIA-LYASE 3 714 - -
Car02g02234 714 Gene3D - 16 262 IPR024083 -
Car02g02234 714 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 198 214 IPR022313 GO:0016841
Car02g02234 714 Gene3D Fumarase/aspartase (Central domain) 263 709 - -
Car02g02234 714 Gene3D - 528 649 IPR023144 -
Car02g02234 714 SUPERFAMILY L-aspartase-like 24 714 IPR008948 GO:0003824
Car02g02234 714 CDD PAL-HAL 61 525 IPR001106 -
Car02g02234 714 Pfam Aromatic amino acid lyase 63 527 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02234 Car-Chr2 52415110 52418099 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02234 18 714 Monolignol Biosynthesis Gene Families AT2G37040 72.675 0.0 1076
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02234 K10775 - gmx:100787872 1219.91