Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02202 ATGCAGGCATCAGAACAACATAGAAGTTCAAGTATGTACTATCAACCATTACAAGAAATAGAATCATACTGCTTACCGCAGTATCGAAATCTAAATCATCAGATGTACTACAATGATGGAGGAGGTCATGGAACTCAATTCTCCACTCAAAGTTCCTCTGACCTTTACTGCACGTTGGAATCATCGTCCGCAGCTGGAAGTTTCGCCGTTTACAACTCTCCTTCAACGGTTAGTTTCTCGCCTAATGATAGTCCAATGTCACAGCAAGATTCTCAGACTCAGTCATATCCGCACGATCAATATCATTCCCCTGACAATAATATTTATAGCTCTCCAAGGAGTGGATCCTGTATAACCGAAGATTTAAGTAGCTTCAAGCACAAGCTAAGAGAATTGGAAAATGTAATGCTTGGTCCTGACTCTGATTATAATCTTGTTGATAGTTATGACAGTGCCATGAGCAATGGAAACGATTTCGTTTCGCTTGAAATGGACAGTTGGAGACAAACAATGGTAGCGATTTCAAGCAAAAATCTAAAGCATATCCTTACTGTATGTGCCAAAGCAATTGCAGACAATGATTTGCTAATGGCACAATGGCTGATGGACGAGTTACGGCAGATGGTTTCGGTTTCTGGCGAACCGATTCAAAGGTTGGGAGCATACATGTTGGAAGGACTTGTCGCACGGTTGTCTGCGTCGGGGAGTTCAATCTACAAATCGTTAAGATGCAAAGAACCAGAAAGTGCTGAGCTTCTATCTTATATGAACATACTTTATGAGGTTTGTCCCTACTTCAAATTCGGATACATGTCTGCAAATGGAGCCATTGCAGAAGCAATGAAATATGAACAGAGAGTTCATATAATCGATTTCCAAATTGCTCAAGGAAGCCAATGGATTTCATTGATTCAGGCTTTTGCAGCTAGGCCTGGTGGCCCACCGCATATCCGGATTACTGGTATCGATGATTCAACATCGGCTTATGCCCGTGGAGGCGGACTACATATAGTCGAAAAGAGGTTATCAAAACTTGCTCAGCATTTCAAAGTGCCATTCGAATTTCATGCTGCAGCCATCTCAGGTTGTGATGTTCAACTGCATAACCTTGGAGTTCGACCGGGGGAAGCTCTAGCTGTAAATTTTGCATTTATGCTACATCACATGCCTGATGAGAGTGTCAGCACTCAGAATCATAGGGATAGGCTTCTGAGGTTAGTTAAAAGCCTATCACCGAAAGTGGTGACACTTGTCGAGCAAGAATCTAACACAAACACCGCTGCATTCTTTCCACGTTTCCTTGAAACAATGGACTATTATGCAGCAATGTTTGAGTCGATTGATGTGACTCTTCCAAGAGAGCATAAAGAGAGGATCAATGTTGAGCAGCACTGTTTGGCAAGAGACTTGGTTAACATCATAGCTTGTGAAGGGGTTGAGAGAGTGGAAAGACATGAGGTGCTTGGGAAATGGAGGTCAAGATTTGCAATGGCTGGTTTCAAACCTTACCCTTTGAGTTCATTGGTGAATGGTACCATAAAGAAATTGCTTGAGAACTATAGTGATAAATATAGACTTCAAGAGAAAGATGGAGCTTTATACCTTGGTTGGATGAATAGAGATTTGGTTGCTTCTTGTGCTTGGAAATGA 1650 0.4188 MQASEQHRSSSMYYQPLQEIESYCLPQYRNLNHQMYYNDGGGHGTQFSTQSSSDLYCTLESSSAAGSFAVYNSPSTVSFSPNDSPMSQQDSQTQSYPHDQYHSPDNNIYSSPRSGSCITEDLSSFKHKLRELENVMLGPDSDYNLVDSYDSAMSNGNDFVSLEMDSWRQTMVAISSKNLKHILTVCAKAIADNDLLMAQWLMDELRQMVSVSGEPIQRLGAYMLEGLVARLSASGSSIYKSLRCKEPESAELLSYMNILYEVCPYFKFGYMSANGAIAEAMKYEQRVHIIDFQIAQGSQWISLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLHIVEKRLSKLAQHFKVPFEFHAAAISGCDVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETMDYYAAMFESIDVTLPREHKERINVEQHCLARDLVNIIACEGVERVERHEVLGKWRSRFAMAGFKPYPLSSLVNGTIKKLLENYSDKYRLQEKDGALYLGWMNRDLVASCAWK 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02202 549 Pfam GRAS domain family 179 549 IPR005202 -
Car02g02202 549 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 549 IPR005202 -
Car02g02202 549 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 15 549 - -
Car02g02202 549 MobiDBLite consensus disorder prediction 78 113 - -
Car02g02202 549 ProSiteProfiles GRAS family profile. 170 549 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02202 Car-Chr2 52175383 52179064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02202 12 549 GRAS Transcription Factor Family AT5G48150 65.556 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car02g02202 GRAS 1.2e-136 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02202 - - gmx:100808300 975.696