Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car02g02200 | ATGTCTGTGAATGGAAGAGTTTCAGGTTCTAATGGAAGATTGTCACAAAAACTGAAGTCTTCTTGGAAAGGAAATGAATCTATGCATGTGTCAAATTCTAGTAGAACATGTAGGAAAAAACTGTTTCTGTTTTGGGTTTTTTGTGTTGTTGTTGCTTTGTGGAGTGTTTGGTTTATTATCTTTAGTTTCAATAGTAGTAAACATTTGATTAAAGAAACAGCTTGTGAAAAGAGTGAACAAACCTTGCTACAACGTTACAATGTCAGTAGGAAACAGTTTCATGCTTTGGCTTCCTTGTTCTCTGGATCAGATCAGATTTTGTCCAACTGTATTGATGAAGAAAAGCTTCAAATGCTATTAAGCATTGGCATAGTCAACACTCCAAAGTCAATGTGTCCAAAGAACCAGGAGTTAGAGAAGGAGCATAGATGTGTTGAAGACTCTCCAGAATCTATGGAACAATGTCCAATTCTCGATGATTTTGTCCAGACGAGGATTGGATTATCATTCCCTTGGAAAACATTGGTCTTTGCAATTCAGGATCATGCAAATTCATATACTTTAATTAAAGGATGCTTTTGGGTCCTTATTGGAACTATAATGTCACACAAGTTGTCTGGCTTCTATTTACATAGAAGGAGTCAAAAGCAGAAGCTAGTTCCGGAGCATCCAGCTACTCAACAAAAGCGGCTTCAACATTTTAAGCATGGTCATTCAAAGGCCGGGAGGTGGAGAAAAAACTTGCTAGTTATTTTTGTGACACTTGGAATTGTTGGTTCCGCGTGGTTATTTTGGCACCTGAATGCAGACATTGTGCAAAGAAGAGAAGCAATGCTTGCCACTATGTGTGATGAGCGAGCACGTATGCTGCAAGATCAGTTCAACGTGAGCATGAACCATGTTCATGCTCTTGCTATTCTTGTGTCTACATTTCACCATGGTAAACATCCTTCTGCAGTGGATCAGAAAATATTTGGAGAGTATACAGAGAGTACGGCATTTGAGAGACCACTTACTAGTGGTGTTGCTTATGCTTTGAAAGTTCTCCATTCTGATAGAACGCATTTTGAGAAGCAGCATGGGTGGACAATTAAGAAAATGGAAACGGAGAACGAGGCATTAGTTCAAGATTGTATTCCAGAAAACTTGGATCCGGCGCCCATTCAAGATGAATATGCACCAGTGATATTTGCTCAAGAAACAGTTTCTCATATTGTATCTATTGACATGATGTCGGGAAAGGAGGATCGGGAGAATATTTTGCGAGCAAGGGCATCTGGAAAGGGTGTTCTGACATCCCCTTTTAAACTGTTAAAGTCCAATCACCTCGGTGTTGTACTTACATTTGCTGTTTATGACTCTAATCTTCCACCAAATGCTACACCCGAACAGCGTATTGAAGCTACTGTGGGGTATCTGGGCGCATCTTACGATGTTCCATCACTGGTGGACAAACTTCTACACCAACTTGCAAGCAAGCAAACCATTGTTGTTAATGTGTATGACACAACTAATGCATCTGCACATATTACAATGTATGGTATTGATGTTCCTGATACTGGCCTACTACACATAAGCAGTCTAGATTTCGGGGATCCGCTACGAAAACATGAGATGCACTGCAGGTTCAAGCATAAGCCTCGACTACCTTGGACGGCAATCAATGCATCTGGTGGGGTATTTGTTATAACCTTGCTTCTGGGACATATATTTTATGCAGCGATAAACCGTATAGCCAAAGTGGAGGAAGACTGTCGTAAAATGGAAGAGCTGAAAGTTCGTGCCGAAGCTGCAGATGTCGCAAAATCTCAGTTTCTTGCGACTGTTTCACACGAGATCAGGACTCCAATGAATGGTGTTTTAGGTATGCTGCAAATGTTGATGGACACAGACCTTGATGACAATCAAATGGATTATTCACAAACTGCTCACGAGAGTGGTAAAGATCTTATATCTGTCATAAATGAGGTTCTAGATCAAGCTAAGATCGAGGCAGAGAAGCTTGAACTTGAAGCTGTAGCTTTTGATCCACACACTATTCTAGATGAAGTTCTATCTCTTTTTGCTGAGAAGTCCAATGAAAAAGGAATTGAGTTGGCTGTTTATGCATCCAATCAAGTACCTAAAGTTGTCATTGGCGATCCTAAACGCTTCCGACAAATTATTACCAATCTTGTTGGCAATTCACTTAAGTTCACTCATGATAAAGGACATGTTTTTGTCTCGATTCATCTTGCAAATGAAGTGAAGAATCCACTTCATGTCATGGATGCGGTGCTGAGAGAAGGCTTAAACATGAATCAGGACATATCCGAAAGAACATGTAATACATTGAGTGGATTTCCTGTAGGCAATAGATGGAAAAGCTGGGAAAATTTCAAAAAGTTAAATAGCATAAATTTGATGGATGAGCCTGAAACTATTCAACTACTAGTAACTGTTGAGGACACTGGTATAGGAATTCCTAACGACGCACAAAGCCGCATATTTACACCTTTCATGCAGGCCGATAGCTCCACTTCTCGAACATACGGTGGAACCGGAATAGGACTTAGCATTAGTAAATGTCTAGTTGACCTCATGGGAGGTGAAATCGGATTTGTAAGCGAGCCTGGAATTGGAAGTACGTTTTCATTTACCGGAAATTTCAGAAAAGGAGAAGCCAAATCTCTGGATGCAAAGTGGCACAAGTACAATCCTTTTGTCTCTGAGTTCCAAGGGTTGAGAGCATTAGTAATAGATAGAAGAAAAATCCGGGCCGAGGTTACACGTTATCACCTGCAGAGATTGGGGATGTCTGTCAATGTAAATACCAGTCTTCAATCAGCATGCTTTTGTCTATCTGATACTTGCAACACAAGTGTGTCGATGCAGTTGGCCATGATTCTTATAGATATAGATTCTTGGGACAAGGAAAGTAGTAGTATCTTATACTCAATCAAGAAACAAAGACAAAATGGCATCAAAGTGGACACATTAAACTTTCCAAAGATTTTTCTCCTGGCCACCCGCCTTAGCCCCGGTGAACGCGACGAGCTGAAGTCAGTTGGTATTGTAGATGATGTTCTAATGAAGCCTCTTTGGTTAAGTGTTTTGATTTGCTACTATAGAGAATCCCTCAAAACAGGGAAGAAACAAATTAATAGAAAGAAAATATCCGAACTTGAAAATTTATTAATACACAAACGAATTTTGGTGGTCGATGATAATGCAGTAAACCGAAAAGTTGCACAAGGCGTTCTTCGGAAATATGGGGCAGTAGTTACATGTGTGGAGGGTGGCAGGGATGCTCTAAAGTTGCTTAAACCGCCGCATAATTTTAACGCATGCTTCATGGATCTTCAAATGCCAGAAATGGATGGTTTTGAGGTGACAAGGCAAATCCGCTTTATGGAGAGCGAGGTGAATGAGAAAATCGCATGTGGCCAAGCATCAATGGAGATGTTTGGTAACATCTCTTATTGGCACACTCCAATACTAGCTATGACTGCCGATGTAACTCGGTCTTCAAATGAAGAATGCAAAAAGTGTGGGATGGATGACTACGTTTCAAAACCATTCGAAGAAGAGAAGCTCTATATGGCAGTCGCACGTGTCTTCAATTTTGGTTCATAA | 3615 | 0.4041 | MSVNGRVSGSNGRLSQKLKSSWKGNESMHVSNSSRTCRKKLFLFWVFCVVVALWSVWFIIFSFNSSKHLIKETACEKSEQTLLQRYNVSRKQFHALASLFSGSDQILSNCIDEEKLQMLLSIGIVNTPKSMCPKNQELEKEHRCVEDSPESMEQCPILDDFVQTRIGLSFPWKTLVFAIQDHANSYTLIKGCFWVLIGTIMSHKLSGFYLHRRSQKQKLVPEHPATQQKRLQHFKHGHSKAGRWRKNLLVIFVTLGIVGSAWLFWHLNADIVQRREAMLATMCDERARMLQDQFNVSMNHVHALAILVSTFHHGKHPSAVDQKIFGEYTESTAFERPLTSGVAYALKVLHSDRTHFEKQHGWTIKKMETENEALVQDCIPENLDPAPIQDEYAPVIFAQETVSHIVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVYDSNLPPNATPEQRIEATVGYLGASYDVPSLVDKLLHQLASKQTIVVNVYDTTNASAHITMYGIDVPDTGLLHISSLDFGDPLRKHEMHCRFKHKPRLPWTAINASGGVFVITLLLGHIFYAAINRIAKVEEDCRKMEELKVRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTDLDDNQMDYSQTAHESGKDLISVINEVLDQAKIEAEKLELEAVAFDPHTILDEVLSLFAEKSNEKGIELAVYASNQVPKVVIGDPKRFRQIITNLVGNSLKFTHDKGHVFVSIHLANEVKNPLHVMDAVLREGLNMNQDISERTCNTLSGFPVGNRWKSWENFKKLNSINLMDEPETIQLLVTVEDTGIGIPNDAQSRIFTPFMQADSSTSRTYGGTGIGLSISKCLVDLMGGEIGFVSEPGIGSTFSFTGNFRKGEAKSLDAKWHKYNPFVSEFQGLRALVIDRRKIRAEVTRYHLQRLGMSVNVNTSLQSACFCLSDTCNTSVSMQLAMILIDIDSWDKESSSILYSIKKQRQNGIKVDTLNFPKIFLLATRLSPGERDELKSVGIVDDVLMKPLWLSVLICYYRESLKTGKKQINRKKISELENLLIHKRILVVDDNAVNRKVAQGVLRKYGAVVTCVEGGRDALKLLKPPHNFNACFMDLQMPEMDGFEVTRQIRFMESEVNEKIACGQASMEMFGNISYWHTPILAMTADVTRSSNEECKKCGMDDYVSKPFEEEKLYMAVARVFNFGS | 1204 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car02g02200 | 1204 | CDD | HATPase_EvgS-ArcB-TorS-like | 718 | 880 | - | - | |
Car02g02200 | 1204 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 713 | 880 | IPR003594 | - | |
Car02g02200 | 1204 | CDD | HisKA | 601 | 662 | IPR003661 | GO:0000155|GO:0007165 | |
Car02g02200 | 1204 | SMART | CHASE_2 | 316 | 515 | IPR006189 | - | |
Car02g02200 | 1204 | Pfam | His Kinase A (phospho-acceptor) domain | 601 | 665 | IPR003661 | GO:0000155|GO:0007165 | |
Car02g02200 | 1204 | SMART | REC_2 | 1062 | 1196 | IPR001789 | GO:0000160 | |
Car02g02200 | 1204 | ProSiteProfiles | CHASE domain profile. | 316 | 540 | IPR006189 | - | |
Car02g02200 | 1204 | Gene3D | - | 572 | 664 | - | - | |
Car02g02200 | 1204 | Gene3D | - | 267 | 319 | - | - | |
Car02g02200 | 1204 | Coils | Coil | 578 | 598 | - | - | |
Car02g02200 | 1204 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 655 | 880 | IPR036890 | - | |
Car02g02200 | 1204 | ProSiteProfiles | Response regulatory domain profile. | 909 | 1040 | IPR001789 | GO:0000160 | |
Car02g02200 | 1204 | Pfam | CHASE domain | 319 | 513 | IPR006189 | - | |
Car02g02200 | 1204 | Gene3D | - | 666 | 886 | IPR036890 | - | |
Car02g02200 | 1204 | CDD | REC_hyHK_CKI1_RcsC-like | 1064 | 1196 | - | - | |
Car02g02200 | 1204 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Car02g02200 | 1204 | Gene3D | - | 1058 | 1202 | - | - | |
Car02g02200 | 1204 | SMART | HisKA_10 | 601 | 666 | IPR003661 | GO:0000155|GO:0007165 | |
Car02g02200 | 1204 | SUPERFAMILY | CheY-like | 1062 | 1201 | IPR011006 | - | |
Car02g02200 | 1204 | Pfam | Response regulator receiver domain | 1064 | 1196 | IPR001789 | GO:0000160 | |
Car02g02200 | 1204 | Gene3D | CHASE domain | 320 | 547 | IPR042240 | - | |
Car02g02200 | 1204 | PANTHER | TWO-COMPONENT HISTIDINE KINASE | 234 | 1201 | - | - | |
Car02g02200 | 1204 | SUPERFAMILY | Homodimeric domain of signal transducing histidine kinase | 588 | 667 | IPR036097 | GO:0000155|GO:0007165 | |
Car02g02200 | 1204 | PANTHER | HISTIDINE KINASE 2 | 234 | 1201 | - | - | |
Car02g02200 | 1204 | SUPERFAMILY | CheY-like | 904 | 1038 | IPR011006 | - | |
Car02g02200 | 1204 | ProSiteProfiles | Histidine kinase domain profile. | 608 | 885 | IPR005467 | - | |
Car02g02200 | 1204 | Coils | Coil | 651 | 671 | - | - | |
Car02g02200 | 1204 | ProSiteProfiles | Response regulatory domain profile. | 1063 | 1200 | IPR001789 | GO:0000160 | |
Car02g02200 | 1204 | SMART | HKATPase_4 | 713 | 885 | IPR003594 | - | |
Car02g02200 | 1204 | PRINTS | Bacterial sensor protein C-terminal signature | 810 | 824 | IPR004358 | GO:0016310|GO:0016772 | |
Car02g02200 | 1204 | PRINTS | Bacterial sensor protein C-terminal signature | 828 | 838 | IPR004358 | GO:0016310|GO:0016772 | |
Car02g02200 | 1204 | PRINTS | Bacterial sensor protein C-terminal signature | 845 | 863 | IPR004358 | GO:0016310|GO:0016772 | |
Car02g02200 | 1204 | PRINTS | Bacterial sensor protein C-terminal signature | 869 | 882 | IPR004358 | GO:0016310|GO:0016772 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car02g02200 | Car-Chr2 | 52154664 | 52162734 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car02g02200 | 42 | 1200 | Miscellaneous Gene Families | AT5G35750 | 59.847 | 0.0 | 1363 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Car02g02200 | CHASE | 3.3e-34 | CL0165 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car02g02200 | K14489 | - | gmx:100805107 | 1839.31 |