Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02198 ATGGGTGGGCAAGATAATGATCCAACCATGGTGAACTCTTCTATTGCTCTTCTTCAAGAAAGGTTTAGACAATTGGAGAAAGTGAAAGAAAGGAGAGAAGGTAAACAACTTGTTAGATTGTTGTCATCACAAAACAACACTATACAACAAAGGTTGGTTGATCCAAATCATAGGCCACTTTATGATCATGATTCTCTTTCTCTTGGACTCAACTTGACTAACAAGCAAAGTGATCATCAAAACAACATGAAATTATCAAGCTCATCTTTGAGTCCATGGTCACAAGGTGAATCTTCAACATCAAGAAATTTTGACAACTACTCAGATGTTGATACTTCACTTCATCTAAACCCTGCTAAAACCCTACCAATTCTCTCTTCAACGCACTTTTTTCGAATCTCACTGTCCCTTCTTCGCTCTCTGCTCAATTCACACTATGCACAGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCTCCCCCCTACTCCGCTACGGCGCCGCACTTCGCCGTGACGTAGCCGCCCCACTTTCCTCTTCTCACTCTCATTCGTTGGGCGAGAATGACACAAAACCCAGATGGTATTCTTTCTCAAGTTTGGAAAAATCCGGCAGTGTTAATCAGCTAAACTTGAAAAAGGATCTGTTTTTGGGCAAACGATATGAATCAACTGCTGCAGAATCTGACGCATCTAGTTCCTCACCAGCAGAGAAATTTGAGTACCAAGCAGAGGTTAGTAGGCTCATGGACCTCATTGTTAACAGtttatacagtaacaaggaagtgtttctcagagaacttatcagTAATGCAAGTGATGCCTTGGATAAGCTGCGGTTTTTGAGTGTTACAGAGCCTGAACTGATGAAGGACGCCATTGATTTTGATATCAGAATTCAAGTTGATAAAGATAATGGGATTATCAATATTACTGATACAGGTATTGGTATGACTAAGCAGGAACTAGTTGATTGTCTTGGAACTATTGCCCAAAGTGGAACTGCAAAGTTTTTGAAGGCTCTAAAGGATAGCAAGGATGCTGGCGGTGACAACAACTTAATTGGTCAATTTGGTGTGGGATTTTATTCTGCTTTTCTGGTGGCTGATCGGGTGGTAGTTTCAACCAAAAGTCCAAGATCTGATAAACAATATGTTTGGGAAGGAGAGGCAAATGCTAGCTCATATACCATATCTGAGGAGACGGATCCTGAGAAGCAGATTCCAAGAGGAACTCGTCTTACACTGCATCTTAAGAGGGATGACAAAGGTTTTGCTCATCCAGAGCGTATTGAGAAGCTTGTGAAAAACTACTCCCAGTTTGTCTCATTCCCTATATACACTTGGCAAGAGAAGGGATTCACCAAAGAAGTAGAGGTTGATGAGGATCCAGCTGAGGCGAAAAAGGATGACCAAGATGAGAATACTGAGaagaagaagaaaactaagaCTGTTGTTGAGAAGTACTGGGATTGGGAGCTCATAAATGAAACCCAACCTATCTGGCTTCGTAATCCTAAAGAAGTTACCAAAGAGGATTACAACGAGTTTTACAAGAAAACATTTAATGAATACATGGAGCCATTGGCATCATCACACTTTACCACAGAGGGTGAGGTAGAATTCAGATCTATACTTTATGTTCCTGCCTATGCTCCATCAGGGAAAGATGACATAGTCAATCCCAAGACCAAGAATATAAGACTTTATGTGAAGAGAGTATTCATTTCAGATGATTTTGATGGAGAACTGTTTCCAAGATATTTAAGTTTTGTCAAAGGTGTGGTTGACTCAAATGACCTTCCACTCAATGTGTCCCGTGAAATTCTTCAAGAGAGCCGCATAGTTCGGATTATGAGGAAACGGTTGGTTAGAAAGGCTTTTGACATGATTCTGGGGATATCCATGAGTGATAACAAAGAGGACTATGAGAAGTTCTGGGATAACTTTGGCAAACACTTGAAATTGGGTTGTATTGAAGACCGTGAGAATCACAAACGTATTGCTCCATTGCTTCGGTTTTTCTCATCCCAAAGTGATGAAGAGTTTATCAGCTTGGATGAATATGTTGAGAACATGAAACCTGATCAAAAGGATATTTATTACATTGCTGCTGACAGTGTGAATAGTGCAAAGAACACACCTTTCTTAGAGAAACTTGCGGAGAAGGATCTTGAAGTGCTGTTTTTGGTGGATCCAATAGATGAGGTTGCCATCCAAAATATTAAATCATACAAGGAAAAGAATTTTGTTGACATTAGCAAGGAAGATTTGGATCTAGGTGATAAGAATGAGGAAAGGGAAAAGGAGATGAAGCAGGAATTTAGTGGGACAATTGACTGGATTAAGAAACGTTTGGGAGATAAAGTAGCAAGTGTGCAGATTTCAAACCGACTGAGCTCTTCACCTTGTGTCCTGGTGTCAGGGAAATTTGGTTGGTCTGCAAACATGGAAAGGCTAATGAAGTCACAAACTATGGGTGATGCCAACAGCTTTGAATTCATGAGAAGCAGAAGGGTGTTTGAGATCAATCCTGACCACCATATTATCAAGAACTTGGATGCTGCATGTAAAACTAATCCTGACGATCAAGAGGCCCTCAGAGCTATCGATCTTTTGTACGATGCAGCTTTGGTATCCAGTGGATTTACGCCTGATAATCCAGCACAACTTGGAGGAAAGATATACGAGATGATGGGTATGGCTCTTAGTGGTAAATGGTCATCTCCTAGCCAGTTTGAGTCCACTCAAACTCAGCCCCATGTCCCAGAAATTGTAGAAGCTGAAGTAGTCGAGCCTACTTCAGCTGACAGCCAAAACTCTCTGAAACTACGAGATATACTCCTATCTAATCGAAGCTTTTGCAGAAAAATGCTCCCTCCGCGACAGCAGTCTCGGGTTGGAGGACTGCAAACGTCTCTGTCTCTGGTTTCTTCGGATCCTCGTCTGTCTCCGGAGGATCCTAGGTCAAACTCTGATAATCTCCGTGAATCCCCTACTGAAAGTGCTAGTTCTAGAGAAACCTGGCCTACTGCTGATGCAATTGCTGCGAAGAAGATGGAGAATGGAAAAGCTGAGATCGATTGTCCTGATCAGTCAGTTATTCGTCGTGTTTCTAGTGCGGACAGGATTAGTCTTCAGGACATTGCTAGAGAAAGAGTGGATGTAATATGTGAAAAAATGCATCGTCTACCTGAAGAGTTTTTAGATGAGCTGAAAAATGGACTTCGAGTTATCCTTGAGGGAGGGAACGGCTCGCAGCATAGAGACGAGTTTTTCATTTTGCAGAAGCTTGTTCAGAGTAGATCTGATTTAACAGCAAAGACATTGATTCGAGCACATCGAGCGCAGCTTGAAATCCTTGTTGCTATAAATACTGGAATTCAGGGATTTTTACATCCTAGCATCAGTCTGTCGCAAACATCGCTGATTGAGATATTTGTGTACAAGAGATGCAGAAACATAGCTTGCCAAAACCAGCTTCCGGCTGATGATTGTTCTTGTGAAACATGCACCAACAACAACGGCTTCTGCAATCTTTGCATGTGTGTTATCTGCAGCAAGTTTGATTTTGAAGTAAATACATGCCGTTGGATTGGATGTGATTTGTGTTCTCATTGGACTCACACAGATTGTGCTATTCGAGAGCAACTTATCTGCATGGGTCCTTCTGTAAAGAATGGATCAGGGCCAAGCGAAATGGTTTTCAGGTGTCAAGCATGCAATAGGACTTCAGAACTGTTGGGCTGGGTTAAAGACGTCTTCCAACATTGTGCACCATCATGGGATGGGGGAGCCTTGATGAGAGAGCTTGATTTTGTTAGTAGGATCTTTCATGGTAGTAAAGACCAACGGGGGAGGAATCTCTTTTCGAAGTGTGATGAACTCAAGGAAAAACTGAAAAGTGGAAAAATGGATTCTAAAGTAGCATGCAGGGCAATATTGATGGTTTTCCAAGAGCTTGACCTGGATTCTCCAAAGAGCCTGGAAAATGCAGAAAGTGGAAGATTGATTGCTCCACAGGAGGCATGCAATAGAATTGCTGAAGTGGTGCAGGAGGCTATAAGAAAGATGGAATTAGTAGCTGATGAGAAGATGAGAATGTTCAAGAAGGCTCGCTTAGCTGTTGAGGCTTGTGATCGTGAATTAGCAGACAAGGCCAGAGAAGCAGGAGAACTCAAGATGGAGAGGCAAAAAAAGAAGTCACAGATTGAAGAACTGGAGAGAATTGTAAGGCTTAAAAATGCAGAGGCTGATATGTTTCAGTTGAAGGCTAATGAGGCCAAACGGGAGGCTGAGAGGCTCCAGAGGATTGCTCTTGCCAAATCTGATAAATCGGAGGAAGAATATACTAGCAACTATTTGAAACAAAAATTAAGTGAGGCTGAGGCTGAAAAGCAATATCTGTATGAGAAAATCAAATTGCAGGAGAGTTCTCGGTTATCACAGAGCAGTGGTGACCCCTCCTCAATGCTGATGTATTCCAAAATCCATGATCTCCTATACAATGGTCCTCCCAAGGCAGACAGTCAATCTAACGACCGCCACCCTTTCCGTACAAACCCATGA 4671 0.404 MGGQDNDPTMVNSSIALLQERFRQLEKVKERREGKQLVRLLSSQNNTIQQRLVDPNHRPLYDHDSLSLGLNLTNKQSDHQNNMKLSSSSLSPWSQGESSTSRNFDNYSDVDTSLHLNPAKTLPILSSTHFFRISLSLLRSLLNSHYAQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSPLLRYGAALRRDVAAPLSSSHSHSLGENDTKPRWYSFSSLEKSGSVNQLNLKKDLFLGKRYESTAAESDASSSSPAEKFEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRFLSVTEPELMKDAIDFDIRIQVDKDNGIINITDTGIGMTKQELVDCLGTIAQSGTAKFLKALKDSKDAGGDNNLIGQFGVGFYSAFLVADRVVVSTKSPRSDKQYVWEGEANASSYTISEETDPEKQIPRGTRLTLHLKRDDKGFAHPERIEKLVKNYSQFVSFPIYTWQEKGFTKEVEVDEDPAEAKKDDQDENTEKKKKTKTVVEKYWDWELINETQPIWLRNPKEVTKEDYNEFYKKTFNEYMEPLASSHFTTEGEVEFRSILYVPAYAPSGKDDIVNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGISMSDNKEDYEKFWDNFGKHLKLGCIEDRENHKRIAPLLRFFSSQSDEEFISLDEYVENMKPDQKDIYYIAADSVNSAKNTPFLEKLAEKDLEVLFLVDPIDEVAIQNIKSYKEKNFVDISKEDLDLGDKNEEREKEMKQEFSGTIDWIKKRLGDKVASVQISNRLSSSPCVLVSGKFGWSANMERLMKSQTMGDANSFEFMRSRRVFEINPDHHIIKNLDAACKTNPDDQEALRAIDLLYDAALVSSGFTPDNPAQLGGKIYEMMGMALSGKWSSPSQFESTQTQPHVPEIVEAEVVEPTSADSQNSLKLRDILLSNRSFCRKMLPPRQQSRVGGLQTSLSLVSSDPRLSPEDPRSNSDNLRESPTESASSRETWPTADAIAAKKMENGKAEIDCPDQSVIRRVSSADRISLQDIARERVDVICEKMHRLPEEFLDELKNGLRVILEGGNGSQHRDEFFILQKLVQSRSDLTAKTLIRAHRAQLEILVAINTGIQGFLHPSISLSQTSLIEIFVYKRCRNIACQNQLPADDCSCETCTNNNGFCNLCMCVICSKFDFEVNTCRWIGCDLCSHWTHTDCAIREQLICMGPSVKNGSGPSEMVFRCQACNRTSELLGWVKDVFQHCAPSWDGGALMRELDFVSRIFHGSKDQRGRNLFSKCDELKEKLKSGKMDSKVACRAILMVFQELDLDSPKSLENAESGRLIAPQEACNRIAEVVQEAIRKMELVADEKMRMFKKARLAVEACDRELADKAREAGELKMERQKKKSQIEELERIVRLKNAEADMFQLKANEAKREAERLQRIALAKSDKSEEEYTSNYLKQKLSEAEAEKQYLYEKIKLQESSRLSQSSGDPSSMLMYSKIHDLLYNGPPKADSQSNDRHPFRTNP 1556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02198 1556 MobiDBLite consensus disorder prediction 994 1050 - -
Car02g02198 1556 MobiDBLite consensus disorder prediction 1540 1556 - -
Car02g02198 1556 MobiDBLite consensus disorder prediction 1511 1556 - -
Car02g02198 1556 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 212 969 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Car02g02198 1556 SUPERFAMILY HSP90 C-terminal domain 813 933 IPR037196 -
Car02g02198 1556 PANTHER BNAA05G29880D PROTEIN 212 969 - -
Car02g02198 1556 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1094 1116 IPR004082 -
Car02g02198 1556 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1439 1459 IPR004082 -
Car02g02198 1556 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1151 1166 IPR004082 -
Car02g02198 1556 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1296 1315 IPR004082 -
Car02g02198 1556 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1478 1500 IPR004082 -
Car02g02198 1556 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1136 1151 IPR004082 -
Car02g02198 1556 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1177 1198 IPR004082 -
Car02g02198 1556 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1223 1243 IPR004082 -
Car02g02198 1556 CDD HATPase_Hsp90-like 281 476 - -
Car02g02198 1556 Pfam Coiled-coil region of Oberon 1404 1535 IPR032535 -
Car02g02198 1556 Gene3D - 530 702 - -
Car02g02198 1556 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 272 486 IPR036890 -
Car02g02198 1556 MobiDBLite consensus disorder prediction 72 109 - -
Car02g02198 1556 Gene3D - 258 500 IPR036890 -
Car02g02198 1556 Gene3D - 703 789 - -
Car02g02198 1556 MobiDBLite consensus disorder prediction 1511 1525 - -
Car02g02198 1556 Coils Coil 1424 1479 - -
Car02g02198 1556 CDD PHD_OBE1_like 1216 1275 - -
Car02g02198 1556 SMART PHD_3 1216 1276 IPR001965 -
Car02g02198 1556 MobiDBLite consensus disorder prediction 999 1014 - -
Car02g02198 1556 ProSitePatterns Heat shock hsp90 proteins family signature. 292 301 IPR019805 GO:0005524|GO:0006457|GO:0051082
Car02g02198 1556 Pfam Hsp90 protein 459 948 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Car02g02198 1556 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 294 454 IPR003594 -
Car02g02198 1556 Pfam PHD - plant homeodomain finger protein 1186 1309 IPR032881 -
Car02g02198 1556 Hamap Chaperone protein HtpG [htpG]. 269 934 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Car02g02198 1556 SUPERFAMILY Ribosomal protein S5 domain 2-like 532 790 IPR020568 -
Car02g02198 1556 Coils Coil 15 35 - -
Car02g02198 1556 MobiDBLite consensus disorder prediction 1029 1043 - -
Car02g02198 1556 Gene3D - 790 937 IPR037196 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02198 Car-Chr2 52132745 52146218 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02198 1186 1336 PHD Gene Family AT5G57380 29.936 6.38e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02198 K09487 - gmx:100806710 1320.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02198 02 52132745 52146218 Car02g02198 02 52132745 52146218 ECH