Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02194 ATGTCCTCAGAATCAGATGTTGCCAACATAGAACTTAGTGCTAGCATACTCATTACTACTAACAGTAGTAAATACTGCAAGCAATGGCGTAAACTTAGTTTATACATAGGATTCCTCGTTTCTTTGAAGAAGCCTATAACTTCTAGTAACAACTATGAAGAATTTCCACCATCATCACTTTCTGCAATACCATATACTTCTTTGCCTCATTCTAGAACCTCCTCTGCGAAATCTTTCGTTGTAATTGATATAGCAGAGGAAGATATTGCTGGGATTGTGAGGAATAAGGACTTGAAATCTTTTCTTGAGTTTGGTGGGATTGACCGAGTTTGTGAAGTTCTTCGCAGTCAAAATCATCATTCATCAGAGAGGATCACTAGCAACCTTGGAGCAAGCTTCTCTGGCTTTTTATGGAATACCTGCAAGGACAATCGTTACACAGTTTCAATGCTTCTGATTTCAGCCTTATTCTCCTTAGCCATAGGGTTCATGCAGGAAGGATTTAAATATGGTTGGCATGATGGTGTTGCCATAGTTTTCGCTGTTATACTTCTGCTTGCATTCTCTTCAATAACAAGCTTTCGGCGTGAAAAGAAAATGATGATTAAACCGACAAAGGGAAAAGGCGAGGAGATGAAATTCAATGTTAAAAGAGGTGAAGGGTTACAAGAGGTTGATCTTACTCTTGCCGTCTCCGATATTGTGGTGGGTGACATGGTGTATCTGAGTCCCCATGATGAGGTTCCAGCTGATGGTTTGCTTGTAAGTCCTGAAATCCTTGTGCTGGCTGAGGGAATACAAAAAGAAAAAATTGATCGCGAGGGGAATCCATTTCTTATGGCTGGTTCAGAGGTGATTGCAGGTTATGGACAGATGCTTGTGACATCAGTTCGAAACAAATCGGATTTGGCTGAGATGAAGGACTTTATGGGCTGTCATCCTAAAAAGATAGGCCTGTTGGAGAGTCTAATTGAGAAACCAATTTCATACCTTGACAAAGCTTCTCTTTTTATCTTCACATTGGTTGCACTTGTGTTGTTCATTCGCCTGATATGTAAAAAAGATGGAGATGGTGGTGGATTGCCAGATATCAAAGGAAATGTCTCAGTCGGTTTGTTGATGAAAGTTGTCGAGAATATTATTTTGAGACCACAAGGAAGGATTTCCATTTTAGCAGGTGTTTTTACTGTTGCAATGATGTGTGTGCAACACGGAGTGCCACTTATAGTAACTCTTATTCTCCATTACCAGATTGATGATGTAGTATCGGACCAAAAAGTTGTCTTTAATGATTTATCAGCTTGTACAACATTAGGGTTGGTAACTGTTATCTGCATTGATGTATCAGGTGGTGGACTAATATTTAAGCCAATGGAAGTCAGTAGAGTATGGATGGGGGAGACAGATATTGGGGAGGTTGAGATATCAGAAACAGGTCTAGTTGTATTTGACAAGCTTAAACAAGGAGTTGGTTTATCAGTTCTTgcaccagaactatctccttctcatgtgcatccacttgtttcttgggcagaaaaaaaatggaaaatGAACATCAAATCTATCACACAAAATTTTCACATTCTTAACCATAGTAAACTGGACTCTAATCAAGAGGGCAGTGGAGTTTTGGTGAGAAAAGTTAGGGCCAATGAACAAATTATGGACTTGCACTGGAGTGGGGATGCATCCACAATATTGGAAATGTGTTCACAGTACTATGATAGTGAAGGAGAATGCCATTCCATGGAATATCAGAAAATCAAATTTGGGCAGGTTATTCAAGAGATGGAGGATAGTGACCTTAAGCCAATTGCATTTGCTCATAGACCAACACAGGTGCAAGAACTCGAGCAAGACGGGTTGACCTTGTTAGCAATGATAGGTCTCAAATACCAGTATCAAGAATCAACAAAAATAGCGTTAAAAAATCTCCAAAATAATGGAATAGAAATCAAATTGGTCTCAGAGGATGACGATATCATGGTAGTGAAAGACATGGCTTGTGAACTTGGAATAGAACTGCCGGTAGGTGGCCACCTTGAAGGAGGAGAACTTAAAGATTTGAATGATAAAGCTAGATTGGTTAAAGTGGATCAAGCCATAACAATGGCGAGTTTCAGTCTTGAAGACAAGCTTCTCATGGTACGGTGTTTGCAAGACAATGGCAATGTGGTTGCATTCGTTGAACAAAAGTTAATGACTAATCATACTTCAGAAGTTCTGAAGCTAGCTGATGTAGGGATAGTTCATAATTATCTAAGCAGAATATTGGATAGTAGAGACAGTTCTGGTATATCTATCACAAATTTCAGTGCATTGGAACCAATTGTGAAGGCTGGCAGAAGTAAATATCACGATATTCAAAAGTTCATTCAAATTCAGCTGACAGTAGGTATATCATGGTTACTCATAACCTTGATAACAACAATATTCACAGGTGAATCCCCTCTAACAGCAATCCAATTGATTTGGGTGAATGTGCTAATGTGTCTTCTGGGTGGCCTAATGATGGTGATGGAATTAAGTTGCAAGAAAGAGCCTGTGAAACAACCATCTGATAGGAATCAGCCAATTATAACCAAAACAATATGGACAAACATAGTTTTTCAGGTTTTGTATCAAGCTTCTGCATGCATGATACTTGGACTTGCGGGACATGTAACTGACAGAGGAAAGCAAGTTAGGAAAACCATGATCTTCAACACATTGGTTTTTTGCCAGCTGTTCAATCTGCTCAAAACTGTGGATTGGTTGAAAACAAAAGATTTCAAGAACTGTTTCTCAGTGGCTGTAGGAGGTTGTATTGTTATGCAGGTTGTGGTAATTGAGTATGCAAAAGCCCTAGCGGGTTACATGAGGCTGAATGCCACTGGATGGGTAATTTGTGTCCTGGTTAGTGCTCTTCCATGGGTATTTGAACTGGCCTTGAAGAAGACTCTTTCAGTTTGCTTCATCACAAATTGTACTTCACCGTTAGATTCTCTAGAGTCTACACCACAACCATGGTTCTATCTTTATTTGGGTCTTCCCTTTATGATGTTCCTACAACTAATAGGTATGACATTTCGCTGA 3075 0.386 MSSESDVANIELSASILITTNSSKYCKQWRKLSLYIGFLVSLKKPITSSNNYEEFPPSSLSAIPYTSLPHSRTSSAKSFVVIDIAEEDIAGIVRNKDLKSFLEFGGIDRVCEVLRSQNHHSSERITSNLGASFSGFLWNTCKDNRYTVSMLLISALFSLAIGFMQEGFKYGWHDGVAIVFAVILLLAFSSITSFRREKKMMIKPTKGKGEEMKFNVKRGEGLQEVDLTLAVSDIVVGDMVYLSPHDEVPADGLLVSPEILVLAEGIQKEKIDREGNPFLMAGSEVIAGYGQMLVTSVRNKSDLAEMKDFMGCHPKKIGLLESLIEKPISYLDKASLFIFTLVALVLFIRLICKKDGDGGGLPDIKGNVSVGLLMKVVENIILRPQGRISILAGVFTVAMMCVQHGVPLIVTLILHYQIDDVVSDQKVVFNDLSACTTLGLVTVICIDVSGGGLIFKPMEVSRVWMGETDIGEVEISETGLVVFDKLKQGVGLSVLAPELSPSHVHPLVSWAEKKWKMNIKSITQNFHILNHSKLDSNQEGSGVLVRKVRANEQIMDLHWSGDASTILEMCSQYYDSEGECHSMEYQKIKFGQVIQEMEDSDLKPIAFAHRPTQVQELEQDGLTLLAMIGLKYQYQESTKIALKNLQNNGIEIKLVSEDDDIMVVKDMACELGIELPVGGHLEGGELKDLNDKARLVKVDQAITMASFSLEDKLLMVRCLQDNGNVVAFVEQKLMTNHTSEVLKLADVGIVHNYLSRILDSRDSSGISITNFSALEPIVKAGRSKYHDIQKFIQIQLTVGISWLLITLITTIFTGESPLTAIQLIWVNVLMCLLGGLMMVMELSCKKEPVKQPSDRNQPIITKTIWTNIVFQVLYQASACMILGLAGHVTDRGKQVRKTMIFNTLVFCQLFNLLKTVDWLKTKDFKNCFSVAVGGCIVMQVVVIEYAKALAGYMRLNATGWVICVLVSALPWVFELALKKTLSVCFITNCTSPLDSLESTPQPWFYLYLGLPFMMFLQLIGMTFR 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02194 1024 Gene3D - 505 626 IPR023299 GO:0000166
Car02g02194 1024 Gene3D - 770 983 - -
Car02g02194 1024 SUPERFAMILY Calcium ATPase, transduction domain A 228 307 IPR008250 -
Car02g02194 1024 Gene3D - 296 484 - -
Car02g02194 1024 SUPERFAMILY HAD-like 622 758 IPR036412 -
Car02g02194 1024 Gene3D - 627 769 IPR023214 -
Car02g02194 1024 PANTHER CATION-TRANSPORTING ATPASE PLANT 68 997 - -
Car02g02194 1024 SUPERFAMILY Calcium ATPase, transmembrane domain M 145 979 IPR023298 -
Car02g02194 1024 Pfam E1-E2 ATPase 214 349 - -
Car02g02194 1024 Pfam Cation transporting ATPase, C-terminus 816 978 IPR006068 -
Car02g02194 1024 Gene3D - 213 295 - -
Car02g02194 1024 PANTHER CATION TRANSPORTING ATPASE 68 997 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02194 Car-Chr2 52118992 52123268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02194 24 1004 Primary Pumps ATPases AT3G63380 31.028 4.26e-120 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02194 K01537 - gmx:102661547 962.985