LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car02g02182	ATGtcttcaacttcttcttcttcttcttcatcatcacctcaacttgcatcttcttcAAATGTTGacaacaacaataacaataataataataataacaaCATTCTTGGTGGTCCTAGCAATGAAATATTTGAAGCACCTTCTTCCTCTCGTCAACGTGCTATCAATGAAGTTTGGCCTGCACCTGTTGTTGAATCATTAGCTACTCAAGTTGCCATTGATTCTTCTCTTTTTCATGGTCCTCTTTCTGCTGCTTCTGCTCTTTCCATTATTTTTCAGGTTTGTTCTACATGGAGAGAAGTGTCGCGCTCGAATCTACTGTGGGAGGAGCTCACGAGACGCATCTGGCGCAGAACCTATCAATTAAGAGACACGTGGCATCTAGAGTACATCTACTGGCATCGAACGGCTAGGAACTTCAGCACTGGTACACACGCCTTAGTGGTCCCACAATACGACCCTGGCGATCACCATCAAACCCTCATCTGCCGTTGCCTCACTCTCTCCGACACCCACCTCGCTTGCGGTTTCGTCGACGGCACCGTTCGTTTATTCGATCTCATCACCGGCGCACACGTCACCACTTTCTGGTCCACCCACGGTCATCTATTCGGCCCCTTCTCACAATCTGTTTCGGGAATCGTAATTGCAAATGAAAATTCTACTCTCGCATTTGCAAGGCTGGATGGAGATGTATACGTGGCAATTCTTAATGGGCCTGTACTTGGGCCCGGGCCCGGGCCCATCCTTGCACGACGCGCAATCCTTGGTGATGTTGTTAACAACGGAGTGTTGGTAGAATTTGCTGGCTGTCGCCTATGGTGGGTGGGCTTATTTGCGGGCCATGCGGGTGGAGCTTTTCAAATATGGAACGCTCAAACGGAACAGCGTGTGTTTATTGGCGGTTCATTAACTGACCCGGAAACGGTTCAAGGATGGCATATGTTAACCGAGTTAGTTGAACCGGTGGGTCGAGTACGAGTAACGGAAGGGGAATTTGTAGTGGCGTGCACGAGTTCGAGGTTGGTTAGTTTCAACTTGAGAAACCCAGAGGTTTTAATACGTGACGTGGGGTCCACAACGGGTTTCGTGGTGGGTTCGTTGGATGTTAGCCACGAGGTATTTGTGATAGTGGAGAGGAATGGGGTGGGGACAGTAAGGCGCGTGTGTACATTTGAGCGCGTGAGTAGGTTTAGATTAAGAAGTTCATGGTTGAGGGGTTTGTTAGGGTGCATGAACCTGGGATACGTTATAACATATTCTGGTAGTGCTGGTTTGTTGAGAGTGTGGGACATACATGAACCTGCGGCGCGGTTGTGTGTAACAGTTGGTGTTACAGATGAGGGTCATGTTCATGCTAATGCTAACAGCATGGTTGCTAATCGAACTCACGTCGCTATCTCATCTAATGACTCTTCTATACACTTATTGGATTTTAGTGTACAGTAA	1446	0.4557	MSSTSSSSSSSSPQLASSSNVDNNNNNNNNNNNILGGPSNEIFEAPSSSRQRAINEVWPAPVVESLATQVAIDSSLFHGPLSAASALSIIFQVCSTWREVSRSNLLWEELTRRIWRRTYQLRDTWHLEYIYWHRTARNFSTGTHALVVPQYDPGDHHQTLICRCLTLSDTHLACGFVDGTVRLFDLITGAHVTTFWSTHGHLFGPFSQSVSGIVIANENSTLAFARLDGDVYVAILNGPVLGPGPGPILARRAILGDVVNNGVLVEFAGCRLWWVGLFAGHAGGAFQIWNAQTEQRVFIGGSLTDPETVQGWHMLTELVEPVGRVRVTEGEFVVACTSSRLVSFNLRNPEVLIRDVGSTTGFVVGSLDVSHEVFVIVERNGVGTVRRVCTFERVSRFRLRSSWLRGLLGCMNLGYVITYSGSAGLLRVWDIHEPAARLCVTVGVTDEGHVHANANSMVANRTHVAISSNDSSIHLLDFSVQ	481

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car02g02182	481	SUPERFAMILY	WD40 repeat-like	162	478	IPR036322	GO:0005515
	Car02g02182	481	PANTHER	TRANSCRIPTIONAL REGULATOR STERILE APETALA	9	480	-	-
	Car02g02182	481	PANTHER	WD40 REPEAT PROTEIN 12, 37	9	480	-	-
	Car02g02182	481	SUPERFAMILY	F-box domain	90	134	IPR036047	GO:0005515
	Car02g02182	481	MobiDBLite	consensus disorder prediction	1	42	-	-
	Car02g02182	481	Gene3D	-	114	240	IPR015943	GO:0005515
	Car02g02182	481	Gene3D	-	269	481	IPR015943	GO:0005515

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	SAP	Car02g02182		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car02g02182	-		-	gmx:100807240	597.816