Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02166 ATGCCTCAGGAGAGTAGCTTACCAAACTCAATTTTCACATCTCCATCGAAGAGAATATTGAACTTGAAGGCTTCAGTTTTTAATAACAGTGATGTAACAGAGGAAATCAACGATCATGAATTGGCTCACAGGAAAGCAGAGGAAGCAGcatcaaggaggaatgaagcagcagaatggcttcgaggaatggacgaagtggcttgtgcgtcactgtcgagagaaccctccgaacaagaattttgcctcgctcttcgcaatggtctcattctctgcaacgttcttaacagagtcaatcccggtgctgtactcaaggtggtcgataatccactccctgccgttcattcttcagagggacccgctcattctgccattcagtatttcgaaaacatgaagaattttcttgatgctgttaaggatatgactcttttgaccttcgaagcttctgatttggaaaagGGTGGTTCATCAAGTAAAGTTGTGGACTGCATTCTCTGTTTGAAAGGGTATTATGAATGGAAGCTATCAGGTGGAATTGGGGTTTGGAGGTATGGAGGAACTGTCAGGATTACTTCTTTCCCCAAAGGAACTCCTTCTTCTTTATTGGGCAGTGAAAGTGCTAATGAGTCCCTTGATGAGTCTCAGTCCTCACAATATAAACAGTTGCTTGAATTTCTTCATATGTCTCCAGTGGTCTCAACTGAAGAAACCAGAACTGCAAATGCTCTGGCTTTCCTGTTTGATCACTTTGGACTCAAACTTCTCCTGGCTTACCTTAGCGAGACAGACGGGGTTGAAGATCTTCCGCTCAATGCAATGGTAATTGATACTTTTCTCAGCAAGATAGCAAGGGATTTTTCTGCGTTGCTTGTTTCTCAAGGCACTCAGCTTGGATTTTTGCTCAAGAAAATATTGAAAAGCGATATTGGTTGCCTATCTAAGAGAGAATTCATGGAAGCTATCACATTATATCTTAATCAAAGAAGTAATTTGACGTCAGATGATTTATCTAAATTCTGCTCTTGTGGTCGGAAACGCGATAGTACTCAACATAATGTCAATTATTCAGCCAAACATGCTGAAATAATTGATGCTCAGCAGAAACAACTTGAGGGAATGAAATACTTCTTGGAGGAGATAAAACAGGAGGTCACACAGATTCAATCTGAATGGGACCGAGAACTGAGGAGGCTCGtgcaagatctcaaaggagccattagggtctactgtagagtgaggcctttcttaccagggcaatcaaatggacaatctacagtagattatataggagaagatggaaacataatgattgtgaatccccttaagcagggaaaagatgctagaagggtattttccttcaataaggtgtttgcaacaaatgccacccaagaacaaatatatgccgatactcaaccattggttagatctgctttagatggatataatgcatgcatctttgcatatggacagactggctcagggaagacctacaccatgagtggaccggatctgatgactgaagagacatggggtgtcaactacagggctttgcgtgacttatttcatatctcaaaggaaagagcagatgcaataaaatatgaagttagcgtccagatgattgaaatatacaatgaacaagtgagagatttattagtcagtgatggctctaacagaagatatccttcaagcccatattttctttatttacattatgtcagctttatttatatactgtacatcaaattatttactttttatatacgaaacaactctcaattgaatggtcttaatgtgcctgatgcatgtttggttccggttagttgtactcaagatgttctcgatttaatgaaaattggtcagaggaaccgtgctgtgggtgctactgctctaaatgagcgaagcagtcgttctcatagtgtgttgacggttcatgtcagaggaagggacttaatttctaattcagttcttaagggttgtctccatcttgtggatttggctggaagtgagagagtggagaaatctgaggctgttggtgagagattaaaggaggctcaacatattaataaatctctttctgcacttggggatgttatctctgctttggcacagaagagtcaacatattccttacagaaatagcaagcttacacaagttttgcaagattcattaggtggtcatgcaaagactttgatgtttgttcatataaaccctgaactcaatgcccttggggagacaatcagcacgttgaagtttgctgagagggttgcatccattgaacttggggctgctaaatctaataaagaaaccggtgaaatccgagagctcaaggaagagATATCAAATATCAAATTGGCATTGGAGAGGAAGGAAACTGAACTGGAGCAATGGAAATCTGGAAATGCACGGAATGCCGCAGAAGCTCAGAAACCAAGAGCTGTTTCACCTTTCGGTTTGCCCAAATATGGTAGCAGTGGCAGCATGAAGCCTGAAAATGGTCAAAGATCCATGGATGATAGAAGCTCTGAGGCTAAAAGTTATTCTTCCAGTAAGATTCGAAGGTCGAGATTTCTCTCAACATTTACAGACAAGGACTCGATACCAAAAATGTCTCTTGTAGCCGAAGAAAAGTTAGTGAGCTCAGGGAAGTGTAGATCACCATCACCTCCTATCAGAAGATCAATATCCACTGATAGAGGATCTGCGATTAAAAGCAAGATCAAAATCGACACTATAGAAAATCAACCAATTTCAAAGCAGCCATTTGCAGCTAGAGTACCAGTAAATAAATCTCTTGTCACAGTGACAATGACACCATCTGTAGACAATAACTCAAGGGTCTCACAAGAGCCAGTGAAGCAGAATAGCATTTCTGAACAACCTCTCTTTAACCTCCAGAAAGTAAGCTTCAGGAAAGTTCATCAAGAACATGAAGAGGAACAGTTCAAACAACCATTTGGGGTAGTAAGACAAGGTGGTGTTAGGAAAAGCAAAGCTGACAATAAGGTGAAGGCCAAACATCTTCAACAGTCCCCCTTTAGTATTCAAAAGACTGATTTAATACCTAAATCGACTCCTGACATGGAATTTGCTGGTGATATTGTGGAGGCGCCTCGAAAGAATGATTACTTTGAGCCAGAAAATGATTTTAGTTTTATGGAGTCTGCAGTCAATGGTGTGGTAAATGTTAAAAAGATACGGCACAACATCTCAAGGAATTCGCAGAACATTGAATCAAGAGGAATTGTGCAAGGAGCTGAACCATTGTTGTCTAGTAAAGTTGAAAACAAGCTTTTAAATGGTTCAGGTCGCAATCTTAAGGAAGTGATTATTATGGATGTGCAAGTTGGAGTGCTACCTCAGATAATTTTGTATAGGCTTGAGATCTTGAGGGGTCAGTTTGTGTGA 3402 0.2322 MPQESSLPNSIFTSPSKRILNLKASVFNNSDVTEEINDHELAHRKAEEAASRRNEAAEWLRGMDEVACASLSREPSEQEFCLALRNGLILCNVLNRVNPGAVLKVVDNPLPAVHSSEGPAHSAIQYFENMKNFLDAVKDMTLLTFEASDLEKGGSSSKVVDCILCLKGYYEWKLSGGIGVWRYGGTVRITSFPKGTPSSLLGSESANESLDESQSSQYKQLLEFLHMSPVVSTEETRTANALAFLFDHFGLKLLLAYLSETDGVEDLPLNAMVIDTFLSKIARDFSALLVSQGTQLGFLLKKILKSDIGCLSKREFMEAITLYLNQRSNLTSDDLSKFCSCGRKRDSTQHNVNYSAKHAEIIDAQQKQLEGMKYFLEEIKQEVTQIQSEWDRELRRLVQDLKGAIRVYCRVRPFLPGQSNGQSTVDYIGEDGNIMIVNPLKQGKDARRVFSFNKVFATNATQEQIYADTQPLVRSALDGYNACIFAYGQTGSGKTYTMSGPDLMTEETWGVNYRALRDLFHISKERADAIKYEVSVQMIEIYNEQVRDLLVSDGSNRRYPSSPYFLYLHYVSFIYILYIKLFTFYIRNNSQLNGLNVPDACLVPVSCTQDVLDLMKIGQRNRAVGATALNERSSRSHSVLTVHVRGRDLISNSVLKGCLHLVDLAGSERVEKSEAVGERLKEAQHINKSLSALGDVISALAQKSQHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNALGETISTLKFAERVASIELGAAKSNKETGEIRELKEEISNIKLALERKETELEQWKSGNARNAAEAQKPRAVSPFGLPKYGSSGSMKPENGQRSMDDRSSEAKSYSSSKIRRSRFLSTFTDKDSIPKMSLVAEEKLVSSGKCRSPSPPIRRSISTDRGSAIKSKIKIDTIENQPISKQPFAARVPVNKSLVTVTMTPSVDNNSRVSQEPVKQNSISEQPLFNLQKVSFRKVHQEHEEEQFKQPFGVVRQGGVRKSKADNKVKAKHLQQSPFSIQKTDLIPKSTPDMEFAGDIVEAPRKNDYFEPENDFSFMESAVNGVVNVKKIRHNISRNSQNIESRGIVQGAEPLLSSKVENKLLNGSGRNLKEVIIMDVQVGVLPQIILYRLEILRGQFV 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02166 1133 SUPERFAMILY Calponin-homology domain, CH-domain 44 194 IPR036872 -
Car02g02166 1133 Coils Coil 29 49 - -
Car02g02166 1133 MobiDBLite consensus disorder prediction 798 847 - -
Car02g02166 1133 Coils Coil 764 791 - -
Car02g02166 1133 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 28 397 - -
Car02g02166 1133 Pfam Kinesin motor domain 410 757 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car02g02166 1133 PANTHER KINESIN-LIKE PROTEIN KLP-3 398 1107 - -
Car02g02166 1133 Gene3D Kinesin motor domain 399 798 IPR036961 -
Car02g02166 1133 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 398 1107 - -
Car02g02166 1133 MobiDBLite consensus disorder prediction 831 847 - -
Car02g02166 1133 SMART ch_5 52 169 IPR001715 GO:0005515
Car02g02166 1133 PRINTS Kinesin heavy chain signature 707 728 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car02g02166 1133 PRINTS Kinesin heavy chain signature 627 644 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car02g02166 1133 PRINTS Kinesin heavy chain signature 658 676 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car02g02166 1133 PRINTS Kinesin heavy chain signature 479 500 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car02g02166 1133 ProSiteProfiles Kinesin motor domain profile. 404 757 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car02g02166 1133 PANTHER KINESIN-LIKE PROTEIN KLP-3 28 397 - -
Car02g02166 1133 SMART kinesin_4 402 765 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car02g02166 1133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 405 794 IPR027417 -
Car02g02166 1133 Pfam Calponin homology (CH) domain 52 171 IPR001715 GO:0005515
Car02g02166 1133 ProSiteProfiles Calponin homology (CH) domain profile. 50 171 IPR001715 GO:0005515
Car02g02166 1133 Gene3D - 41 171 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02166 Car-Chr2 51853829 51862266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02166 398 774 Calmodulin-binding Proteins AT5G65930 40.104 1.95e-72 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02166 K10406 - gmx:100786466 1593.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02166 02 51853829 51862266 Car02g02166 02 51853829 51862266 ECH
Car05g01187 05 54652192 54660834 Car02g02166 02 51853829 51862266 PCT