Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02159 ATGGCTAGTTCTAGAACTAGGCCTCAACGCGCCTCGTCCCCGCCTTCGTTTTCGGTTCGGATGGCCATGAGAATATCTAGATCAAGATGGTTTACTTTCTTAAGAAGAATTTTTCATTATCAAAATGGATCAAGGTCTAATCTTGGTTCTAATCCTTTCAATTCTAGCACTTGGATGATGCTTGAGTTTATTGCCTTGATTTCTCAAATAGTCATTTCTACATTCACTTTGGCTATTTCAAAGATGGAGAAACCTGTTTGGCCTATGAGGGTTTGGATTTGTGGTTATGATATTGGATGTGTTCTTAATCTGCTTCTGGTTTATGGCCGCTACAGTGAAATTTTTCTGATTCAAAGAGATTCTCTCAGCCTTTCTGATTTGGAACAGCAGAGAAACAATCAAGAAACAAGTGTATACAGGATGTCACACTTGATGAACAAATGCAAGACATCACTAGAGTTTTTCTTTGCCATATGGTTTGTGATGGGAAATGTTTGGATTTTTGACTCACGTTTTGGTTCATTTCAACAATCTCCAAAACTTCATGTCCTCTGCATCACTCTGCTTGCTTGGAATGCAATATGTTACTCTTTCCNNNNNNNNNNCCTTTTCTACTTTTTCTTCTGTTATGCTGTTGTGTGCCATTGA 648 0.3781 MASSRTRPQRASSPPSFSVRMAMRISRSRWFTFLRRIFHYQNGSRSNLGSNPFNSSTWMMLEFIALISQIVISTFTLAISKMEKPVWPMRVWICGYDIGCVLNLLLVYGRYSEIFLIQRDSLSLSDLEQQRNNQETSVYRMSHLMNKCKTSLEFFFAIWFVMGNVWIFDSRFGSFQQSPKLHVLCITLLAWNAICYSFXXXXLFYFFFCYAVVCH 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02159 215 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 5 210 - -
Car02g02159 215 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02159 Car-Chr2 51802852 51806128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02159 13 198 C3H Transcription Factor Family AT5G55970 68.280 5.71e-98 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02159 - - gmx:100813670 337.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02159 02 51802852 51806128 Car02g02159 02 51802852 51806128 ECH