Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02158 ATGGAAAATGAGAGGGAGGATGAGATTGAGGACAACATGTCAATGTCACCTCCATCTGTTGGTTCCATGCAGATTGCAGGAAGCAATGGATTTGGTCACAGCATGGAGTTCATGTCTCAAGCATACCTTCCCAATAGGTACTCAGAGATTGACATACAAGTTAAGGATTCTAGTTCCAACCAAGATCCTCCTCTTCCTGTGTATCTCAAGTTTGAAGATGTAGAGTTTAAAGTGAGAAATAGTCAAACAGCTTCCAAAAACCCTGTGAAGACAATGGTGTCAAAGGTATCCACACAACACCATGTTGAAGAAAACAAATACAAGAAGATTTTAAAGGGTATCACAGGAAGCATTGGCCCTGGAGAAATTCTTGCTTTGATGGGTCCTTCTGGTAGTGGAAAAACAACATTGTTGAGAGTTGTAGGAGGAAGATTACTTGATAATGTAAAGGGAAAGATAACTTACAATGATGTTCCATATAGTCCTGTTCTAAAGAGGAGGATTGGATTTGTAACACAAGAGGATGTGCTTTTCCCTCAACTTACAGTAGAAGAAACATTAATCTTCTCTGCATTCTTAAGACTCCCAACAAACATGAGCAAGCAACAAAAATATGCAAGAGTTGAGACCACTGTCAAGGAGTTAGGCCTAGAAAGATGTCGCCACACGAAAATAGGTGGAGGATTTCTAAAAGGCATATCAGGAGGAGAAAGGAAGAGAACCAGCATAGGTTATGAAATTCTTGTTGATCCTTCACTGCTTCTACTTGATGAGCCAACATCAGGTCTTGATTCCACCTCAGCAAACAGACTTCTTCTCACTCTTCAAGGACTAGCCAAGGCTGGTAGAACTATAATCACAACAATTCACCAGCCATCCAGCAGAATCTTTCACATGTTTGACAAACTTCTTCTGATATCAGAAGGCTATCCTGTTTATTATGGGAAAGCTAGAGACACAATGGAGTACTTTTCATCCTTAAGGTTCATTCCAGAAATACCGATGAATCCTGCAGAATTCTTGCTTGACTTGGCAACTGGACAAGTGAATGATATAGGTGTTCCACAAGATATTTTGAAAGATCAAGAGTCTATTGACCCTTCAATAGCTATTATTAAGTATGTACAACTCAAGTATAAAGACATACTTGAGCCAAAAGAAAAAGAAGAGAATCATGGAGGAGCAAATACTGCACCAAAACATCTTCAACTAGCTATTCAGGTTAAAAAGGAATGGACATTGAGTTGGTTAGACCAATTCATTATTCTTTATAAGAGAACATTCAGAGCAAGATGCAAAGACTATTTTGATATACTAAGATTGGTTCAAGCACTTGGAATTGCAGTTTTGTTGGGGCTACTTTGGTGGAAATCTTCAATCAATACTGAGGCTCAACTCAGAGATCAGGTTGGTTTAATGTTCTATATATGTATATTTTGGACATCTTCATGTATTTTTGGAGCAGTCTATGTGTTTCCATTTGAAAAAGTCTACTTAATAAAAGAAAGGAAAGCAGACATGTATAGACTTAGTGTATACTATGCAAGCAGCACTCTATGTGACATGGTGGCACATGTTTTCTATCCAACTTTTTTCATGCTCATTGTGTACTTCATGGCTGGATTTAAGAGCACTGTGGCTTGCTTCTTCCTTACGCTATTCGCAGTTTTGCTAATAGCTATAACAAGTCAAGGGGCAGGAGAACTATTTGGAGCTGCAGTTATGAGCATTCAAAGAGCAGGAATGGTTGCTTCTTTGATACTAATGTTATTCCTTCTAACAGGTGGCTACTATGTCCAGCACATACCAAAGTTCATGCAATGGTTGAAGTATATGTCATTCATGTACTATGGATTCAGGCTACTTCTAAAAGTGCAATATTCAGGAGATCAATTATATGAGTGTGAAAGTGAGGAAGGGTGTAGAACCCTTCAAAGTTCACCTTCATTTGATACTGTAAACTTGAAAGGAGGCTTAAGTGAAGTTTGGGTTCTAATAGCAATGGCTCTTTGTTTTCGGTTGCTTGCTTACTTCTGTCTCCGCAGAAGAATTGATATATGCAATTAG 2067 0.3856 MENEREDEIEDNMSMSPPSVGSMQIAGSNGFGHSMEFMSQAYLPNRYSEIDIQVKDSSSNQDPPLPVYLKFEDVEFKVRNSQTASKNPVKTMVSKVSTQHHVEENKYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVVGGRLLDNVKGKITYNDVPYSPVLKRRIGFVTQEDVLFPQLTVEETLIFSAFLRLPTNMSKQQKYARVETTVKELGLERCRHTKIGGGFLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANRLLLTLQGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGYPVYYGKARDTMEYFSSLRFIPEIPMNPAEFLLDLATGQVNDIGVPQDILKDQESIDPSIAIIKYVQLKYKDILEPKEKEENHGGANTAPKHLQLAIQVKKEWTLSWLDQFIILYKRTFRARCKDYFDILRLVQALGIAVLLGLLWWKSSINTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEKVYLIKERKADMYRLSVYYASSTLCDMVAHVFYPTFFMLIVYFMAGFKSTVACFFLTLFAVLLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHIPKFMQWLKYMSFMYYGFRLLLKVQYSGDQLYECESEEGCRTLQSSPSFDTVNLKGGLSEVWVLIAMALCFRLLAYFCLRRRIDICN 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02158 688 Pfam ABC-2 type transporter 419 627 IPR013525 GO:0016020|GO:0140359
Car02g02158 688 Gene3D - 93 328 IPR027417 -
Car02g02158 688 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 684 - -
Car02g02158 688 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 69 333 IPR003439 GO:0005524
Car02g02158 688 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 326 IPR027417 -
Car02g02158 688 Pfam ABC transporter 111 261 IPR003439 GO:0005524
Car02g02158 688 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 3 684 - -
Car02g02158 688 SMART AAA_5 120 311 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02158 Car-Chr2 51790648 51794760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02158 109 294 Calmodulin-binding Proteins AT2G36910 30.570 9.21e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02158 K05681 - gmx:100815259 1233.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02158 02 51790648 51794760 Car02g02158 02 51790648 51794760 ECH