Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02136 ATGGCTGATTCTGACAACGAATCGGGAGGAACACAGAACGCCGGGAACAGCGAGTTATCACCTCGTGAACAGGACCGATTTCTACCGATAGCGAACGTGAGTAGAATAATGAAAAAGGCGTTACCGGCGAACGCGAAGATCTCGAAAGACGCGAAAGAAACTGTACAGGAATGTGTATCGGAGTTCATAAGCTTCATCACCGGCGAAGCCTCCGATAAGTGTCAGAGGGAGAAACGAAAGACGATCAACGGAGACGATCTACTTTGGGCGATGACTACGCTAGGGTTCGAGGAGTATGTTGAACCTCTGAAGATTTATCTTCAACGATTCAGAGAGATCGAAGGTGAGAAAACCGTTGCTGCAGCACGTGACAAGGACGTGGctcctccttcttcttcttcgtcttcGGTTTACGACTATGGTGCTTCGCAGGTTGGAATGATCATGCATCATCAACATCAGGGACACGTGTACGGTTCTGGTGGTTTTCATCAAGTGCCTGTAACTGGTTCACCTGTTATGGGTAATAAGGGTGGTGGGCCCGGTTATCCTAATCCTGGATCTAATGCGGGTAGACCCAGGTAG 585 0.4701 MADSDNESGGTQNAGNSELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQRFREIEGEKTVAAARDKDVAPPSSSSSSVYDYGASQVGMIMHHQHQGHVYGSGGFHQVPVTGSPVMGNKGGGPGYPNPGSNAGRPR 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02136 194 MobiDBLite consensus disorder prediction 1 25 - -
Car02g02136 194 MobiDBLite consensus disorder prediction 1 20 - -
Car02g02136 194 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2 1 153 - -
Car02g02136 194 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 27 91 IPR003958 -
Car02g02136 194 ProSitePatterns NF-YB/HAP3 subunit signature. 58 74 IPR003956 GO:0005634|GO:0006355|GO:0043565
Car02g02136 194 PRINTS CCAAT-binding transcription factor subunit A signature 55 73 - -
Car02g02136 194 PRINTS CCAAT-binding transcription factor subunit A signature 74 92 - -
Car02g02136 194 PRINTS CCAAT-binding transcription factor subunit A signature 93 111 - -
Car02g02136 194 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 153 IPR027113 GO:0001228|GO:0006355|GO:0016602
Car02g02136 194 MobiDBLite consensus disorder prediction 167 194 - -
Car02g02136 194 Gene3D Histone, subunit A 16 136 IPR009072 GO:0046982
Car02g02136 194 SUPERFAMILY Histone-fold 24 126 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02136 Car-Chr2 51645839 51647101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02136 1 126 CCAAT-HAP3 Transcription Factor Family AT4G14540 84.921 2.29e-76 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Car02g02136 CBFD_NFYB_HMF 1.8e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02136 K08065 - gmx:100813580 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02136 02 51645839 51647101 Car02g02136 02 51645839 51647101 ECH
Car05g01134 05 53710913 53712785 Car02g02136 02 51645839 51647101 PCT