Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02111 ATGGCTACTTTTTTGTCTCTATACCCTTACAATCCTATCTTCTATGTTCCAACTCCTTCATCTAATCATGGTTCTGCTTCTGCTTCTTCCTTTTTCAAACGGACCAAATTCGTAGTGCTTTCTGCACATTCCAATCCCAAGATTCTCAAAACCAACAGAAAATCAACCTATGGGAAATACCTTTCGACATacgatacagatgaagaagatgaagaaatggacgatgaagacgacgacgatgatgaTTGGTTCTCTGATGAGGAATTTGCTGAGCCTGCTGATTTTAATGCTAAGGATAAGAGATTGAAGTCAAAGAAACTTGCAGATAGACAACAGGAAGAAGAACGTGGTGGCGCGAGATCTTTTAATAATGGACAAAGTACTAGATTGCCCAAAAGTCAGAGAATAGCATCTTTACAACAAAATAACAGTGCACAGTATGGTAGACATTCAAAGGAGAAAAGATATCCACATTTGTCTGAAGAGATTGTTTTGGATGTGAAATGGTTACCACTTCTTGATTATTTAAGCACCTTTGGAATTAATGAATCGCAGTTCATCCAAATTTATGAGAGGCACATGTCGTCATTTCAAATTAATGTATGTTCTGCACAAGAAAGGATAGATTACTTATTGAGTCTTGGAGTTAAACATAAAGATATAAAAAGAATCCTTTTGAGGCAACCACAAATTCTGGAGTACACAGTGGAGAACAATTTGAAGACTCATGTTGCTTTCTTGATGGGCTTGGGCGTACCTAGTTCCAAAATAGGGCAGATTATTGCTGCTACTCCATCCCTTTTTTCTTACAGTGTTGAGAATTCGTTGAAACCATCGGCGAGATATTTAATTGAGGAAGTTGGCATCAAGGAAAAAGATTTGGGTAAAGTCATTCAACTGAGTCCTCAAATTCTTGTCCAACGTATTGACATTTCATGGAATACTCGATTTATGTTTCTTACCAAAGAGTTGGGTGCACCCAGAGAGAGTGTTGTAAAGATGGTGACGAAACACCCTCAGCTTCTCCATTACAGCATTGATGATGGATTGCTGCCAAGAATAAATTTCCTAAGGAGCATAGGAATGAAAAATCCAGACATCTTGAAAATCTTGACTAGCCTTACACAGGTGCTATCTCTTTCCTTGGAGGCTAATCTAAAGCCCAAGTACTTGTACTTGGTAAATGAACTTCACAATGAGGTGCAATCCTTGACCAAATACCCTATGTACCTTAGCTTGTCTTTGGAACAGAGAATTCGTCCTCGTCATAAGTTCTTAGTTTCCCTAAAGAAAGCTCCAAAAGGGCCGTTTCCTCTTGGATCTCTAGTTCCAACTGATGAATGCTTTTGTAAACAGTGGGCTGGAACTACTCTTGATAAATATTTGGCATTTCGCCAGAGATTATTGATCAAAAAGTTTGCTGAGAAATATGACAGAAAAATGTGA 1446 0.3679 MATFLSLYPYNPIFYVPTPSSNHGSASASSFFKRTKFVVLSAHSNPKILKTNRKSTYGKYLSTYDTDEEDEEMDDEDDDDDDWFSDEEFAEPADFNAKDKRLKSKKLADRQQEEERGGARSFNNGQSTRLPKSQRIASLQQNNSAQYGRHSKEKRYPHLSEEIVLDVKWLPLLDYLSTFGINESQFIQIYERHMSSFQINVCSAQERIDYLLSLGVKHKDIKRILLRQPQILEYTVENNLKTHVAFLMGLGVPSSKIGQIIAATPSLFSYSVENSLKPSARYLIEEVGIKEKDLGKVIQLSPQILVQRIDISWNTRFMFLTKELGAPRESVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMKNPDILKILTSLTQVLSLSLEANLKPKYLYLVNELHNEVQSLTKYPMYLSLSLEQRIRPRHKFLVSLKKAPKGPFPLGSLVPTDECFCKQWAGTTLDKYLAFRQRLLIKKFAEKYDRKM 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02111 481 MobiDBLite consensus disorder prediction 64 85 - -
Car02g02111 481 MobiDBLite consensus disorder prediction 100 117 - -
Car02g02111 481 Pfam mTERF 174 248 IPR003690 GO:0003690|GO:0006355
Car02g02111 481 Pfam mTERF 236 428 IPR003690 GO:0003690|GO:0006355
Car02g02111 481 MobiDBLite consensus disorder prediction 65 85 - -
Car02g02111 481 MobiDBLite consensus disorder prediction 100 153 - -
Car02g02111 481 Gene3D Transcription termination factor 3, mitochondrial 230 468 IPR038538 -
Car02g02111 481 SMART mt_12 222 253 IPR003690 GO:0003690|GO:0006355
Car02g02111 481 SMART mt_12 258 290 IPR003690 GO:0003690|GO:0006355
Car02g02111 481 SMART mt_12 401 432 IPR003690 GO:0003690|GO:0006355
Car02g02111 481 SMART mt_12 368 400 IPR003690 GO:0003690|GO:0006355
Car02g02111 481 SMART mt_12 295 327 IPR003690 GO:0003690|GO:0006355
Car02g02111 481 SMART mt_12 332 363 IPR003690 GO:0003690|GO:0006355
Car02g02111 481 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF9, CHLOROPLASTIC 28 473 - -
Car02g02111 481 PANTHER CGI-12 PROTEIN-RELATED 28 473 IPR003690 GO:0003690|GO:0006355
Car02g02111 481 MobiDBLite consensus disorder prediction 118 147 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car02g02111 mTERF 2.6e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02111 K15032 - gmx:100809638 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02111 02 51500215 51503100 Car02g02111 02 51500215 51503100 ECH