Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02106 ATGCAGACATCTCATATACATAAAATGTCATATGATTCTGACAGATTCAGCATTGATCCTATACAAAATCTAGAGTCATATTCCTTCATGCCGAATGAAATTCTGGAAAACTACTCATCCTCTGATAACAGTAGCCATTCAATTTTAACCTACCCTTCATTTCATGTTTTAGAACAACATTCCACCCTTGAATCTTCTATGGACAAAAATTCTCCATCTAGTTTTAGTTTCTCACCGAACAACAGTCCGGTCTCGAATCTACACTCAAATTCTTATGCGTTCAGGTCACAGAGTTCTCTTGAAATCATCAATGATTCGTTAGAGAACGAATCTTGTTTGATGCATAACCAGGATGACTTGTGGCACAAGATAAGAGAGCTTGAAAATGCTATGCTAGGACATGATGATGCAGATATGCTAGATATATATGATGATACTGTGATAATTCAAGAAGAATGTGATCCAATTTTGTTAGAGGCTGAGAAATGGAACAAAATGATGGAGATGGTATCAAGAGGGGATTTGAAAGAGATGCTTTTTACTTGTGCAAAAGCGATTGAAGCGAACGATATGGAAATAACTGAATGGTTGATGTCAGAATTGTCTAAAATGGTTTCAGTTTCAGGAAATCCAATTCAAAGGTTAGGAGCATACATGCTTGAAGCTCTTGTTGCAAAACTAGCTTCTTCAGGAAGCACAATATACAAATCATTGAAATGTAAAGAGCCTGTTACTACAACTAGTAGTAAAGAACTACTTTcacatatgcatgcactttatgaaatttgtccttacctcaaatttggatacatgtcagcaaatggagtaatagctgaagccttaaAAAATGAAAGTGAAGTTCATATAATTGATTTTCAGATTAACCAAGGAATCCAATGGATAAGTCTAATCCAAGCTCTTGCTGGTAAACCTGGAGGATCGCCGAAGATTCGAATAACTGGTTTTGATGACTCAACTTCAGCTTATGCTAGGGGAGGAGGGCTTGATGTTGTAGGAAAAAGGTTATCAAAACTTGCACAATCATATAATGTAGTTTTTGAGTTTCATGCTATAAAGGCTGATCCTACTGAGGTGAAACTTGAAGATTTTGAACTACGTCACAGCGAAGCTATTGCTGTGAATTTCGCGATGATGCTACACCATGTACCTGATGAAAATGTACATGGCTGGAATCATCGCGACCGGTTGGTGAGATTAGTGAAGCGATTGTCTCCTAAGGTAGTGACTCTTGTTGAACAAGAATCAAATACCAACAACCTTTCGTTCTTTCCACGTTTCGTCGAGACAATGAACTACTACTTGGCAGTTTTTGAATCAATTGATGTTGCTTTGCCAAGGGAGCACAGAGAAAGGATTAATGTGGAACAGCATTGTTTGGCGCGAGAAGTCGTCAATTTAGTAGCATGCGAAGGATCGGAACGAGTCGAACGCCACGAGCTTCTGAAGAAGTGGAGATCATGTTTCACAATGGCTGGATTCACATCATATCCATTAAGCTCCTTTATTAATTGTTCAATAAGAAATCTTCTAGAAAGCTACCAAGGACTTTACACTCTAGAAGAGAAAGATGGTGCTCTTTATCTTGGTTGGATGAATCAGGCTCTTATTACCTCTAGTGCTTGGAGGTGA 1650 0.3636 MQTSHIHKMSYDSDRFSIDPIQNLESYSFMPNEILENYSSSDNSSHSILTYPSFHVLEQHSTLESSMDKNSPSSFSFSPNNSPVSNLHSNSYAFRSQSSLEIINDSLENESCLMHNQDDLWHKIRELENAMLGHDDADMLDIYDDTVIIQEECDPILLEAEKWNKMMEMVSRGDLKEMLFTCAKAIEANDMEITEWLMSELSKMVSVSGNPIQRLGAYMLEALVAKLASSGSTIYKSLKCKEPVTTTSSKELLSHMHALYEICPYLKFGYMSANGVIAEALKNESEVHIIDFQINQGIQWISLIQALAGKPGGSPKIRITGFDDSTSAYARGGGLDVVGKRLSKLAQSYNVVFEFHAIKADPTEVKLEDFELRHSEAIAVNFAMMLHHVPDENVHGWNHRDRLVRLVKRLSPKVVTLVEQESNTNNLSFFPRFVETMNYYLAVFESIDVALPREHRERINVEQHCLAREVVNLVACEGSERVERHELLKKWRSCFTMAGFTSYPLSSFINCSIRNLLESYQGLYTLEEKDGALYLGWMNQALITSSAWR 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02106 549 ProSiteProfiles GRAS family profile. 166 549 IPR005202 -
Car02g02106 549 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 17 548 IPR005202 -
Car02g02106 549 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 17 548 - -
Car02g02106 549 Pfam GRAS domain family 175 549 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02106 Car-Chr2 51470999 51474270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02106 20 549 GRAS Transcription Factor Family AT5G48150 53.731 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car02g02106 GRAS 3.4e-129 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02106 - - cam:101502619 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02106 02 51470999 51474270 Car02g02106 02 51470999 51474270 ECH
Car05g01095 05 52668803 52672085 Car02g02106 02 51470999 51474270 PCT