Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02102 ATGATGCCGAGTGTTAACCCCGATTCATCCGACAAAGATTCCGAGCCATTTGTGGAAACTGATCCGACCGGTCGATATGGTAGATACAATGAGCTATTAGGGTGTGGTGCTGTGAAGAAAGTGTACCGTGCATTTGATCAAGAGGAAGGAATAGAGGTAGCTTGGAACCAAGTGAAGCTAAGAAACTTTTCTGATGAACCTTCCATGGTGGAAAGACTTTACTCTGAAGTGAGGTTATTGAGAAGCTTAAAAGACAGAAACATCATTGCTCTTTATAGTGTTTGGAGAGATGATCAACGTGACACACTCAATTTCATCACTGAGGTGTGTACTAGTGGGAATTTGAGAGAGTATAGGAAAAAACATAGACATGTTTCTATGAAGGCTTTGAAGAAATGGTCTAAGCAGATTTTGAAAGGGTTGAATTATTTGCACACTCATGAGCCTTGTATCATTCATAGAGATCTCAATTGCAGTAATGTGTTTGTTAATGGGAATGTTGGCCAGGTTAAGATTGGTGACTTAGGTTTGGCAGCAATTGTTGGAGCGAATCACGTTGCACACACAATTCTTGGTACACCAGAGTTTATGGCTCCAGAATTATATGATGAAGACTACACAGAATCAGTGGACATATACTCATTTGGTATGTGTGTACTAGAGATGGTTACGTTGGAAATTCCATATAGTGAGTGTGACAATGTTGCAAAAATATACAAGAAAGTTTCTTCTGGTTTGAGACCTGCTGCATTGAACAAAGTCAAAGATTCAGAGGTAAAGGCTTTCATTGAAAAGTGTCTTGCTCAACCAAGGGCTAGACCTTCTGCTGATGAACTTCTCAAAGATCCTTTCTTTGATGAGGTTATCGATGATGATGACGACGAAAATGAGTATGAATCTGTTGGTTCATACTAA 915 0.3956 MMPSVNPDSSDKDSEPFVETDPTGRYGRYNELLGCGAVKKVYRAFDQEEGIEVAWNQVKLRNFSDEPSMVERLYSEVRLLRSLKDRNIIALYSVWRDDQRDTLNFITEVCTSGNLREYRKKHRHVSMKALKKWSKQILKGLNYLHTHEPCIIHRDLNCSNVFVNGNVGQVKIGDLGLAAIVGANHVAHTILGTPEFMAPELYDEDYTESVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGLRPAALNKVKDSEVKAFIEKCLAQPRARPSADELLKDPFFDEVIDDDDDENEYESVGSY 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02102 304 Gene3D Transferase(Phosphotransferase) domain 1 110 291 - -
Car02g02102 304 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g02102 304 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Car02g02102 304 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 304 - -
Car02g02102 304 CDD STKc_WNK 25 285 - -
Car02g02102 304 PIRSF TyrPK_CSF1-R 117 301 - -
Car02g02102 304 PIRSF TyrPK_CSF1-R 28 132 - -
Car02g02102 304 MobiDBLite consensus disorder prediction 1 23 - -
Car02g02102 304 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g02102 304 SUPERFAMILY Protein kinase-like (PK-like) 17 291 IPR011009 -
Car02g02102 304 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 2 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02102 Car-Chr2 51439874 51442386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02102 6 289 MAP Kinase Kinase Kinase AT5G55560 82.042 0.0 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Car02g02102 Pkinase 6.8e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02102 K08867 - gmx:100816060 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02102 02 51439874 51442386 Car02g02102 02 51439874 51442386 ECH
Car05g01092 05 52612309 52614421 Car02g02102 02 51439874 51442386 PCT