Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02082 ATGGCTTCTAATTCAGACCAGTGGGTGAAGGAGTATAATGAAGCACTGAAACTTGGTGATGATATTAGCAGCATGATTTCTGAGCAGAGTTCCTTTCCTGCATCTGGACCGGAGGCTCAACGTCAATCATCTGCTATAAGAAGGAAGATTACAATATTAGGGACTAGGCTTGATAGCTTGCAGTCCCTTTTGTCAAAGCTTCCTGGAAAGCAACCTTTATCTGAGAAGGAGATGAATCGTCGCAAGGACATGCTTGCAAACTTAAGGTCAAAAGTTAACCAAATGGCTTCCTCACTGAACATGTCAAATTTTGCAAACAGGGATAGCTTGCTTGGTCCAGAAGTAAAACCAGATGTAATGAACAGAATTGTTGGCCTGGACAACAATGGACTTGTTGGATTTCAACGACAAGTTATGAAAGGTTGCTTAACTGAATTGTTTGACCATATATTACTCCAAGTCTGTTCTTTGGATTTGATAGTACATTTTTATTAA 495 0.398 MASNSDQWVKEYNEALKLGDDISSMISEQSSFPASGPEAQRQSSAIRRKITILGTRLDSLQSLLSKLPGKQPLSEKEMNRRKDMLANLRSKVNQMASSLNMSNFANRDSLLGPEVKPDVMNRIVGLDNNGLVGFQRQVMKGCLTELFDHILLQVCSLDLIVHFY 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02082 164 PANTHER SYNTAXIN 1 140 IPR045242 -
Car02g02082 164 SUPERFAMILY t-snare proteins 30 100 IPR010989 GO:0016020|GO:0016192
Car02g02082 164 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02082 Car-Chr2 51217137 51220262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02082 1 140 SNARE and Associated Proteins AT1G79590 70.213 4.80e-68 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02082 K08503 - gmx:100782666 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02082 02 51217137 51220262 Car02g02082 02 51217137 51220262 ECH
Car05g01058 05 52073021 52074743 Car02g02082 02 51217137 51220262 PCT