Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02048 ATGATTTATGGTAGGTGTGCAGCTTGTAAGAGTCAAAGAAGAAGATGCCCTTCTGATTGCATTTTCTCTCCTTATTTCCCTGCCAATGATCCTCAAAGATTTGCATATGTTCACAGAATCTATGGTGGTAGCAATGTTGGAAAAATGCTGCAGCAACTCCCTCACTATGTAAGAGAACAAGCTGCAAATACATTGTATTTAGAAGCACAATGTAGAATTCAAGATCCTGTTTATGGATGTGTTGGAATTATCTCTAAATTGTATCAACAAATCCATGATACAGAAGTTGAGCTGGCCAAAATTCAAACTCAAATTGCTTGTCATAAGAACAAAAATTCACGAGTTGAAGTTCAATCAAATTTCAATATTTTGTCAACTATTGATGCTGAATCAAACTTGAACTTCTTGCCACCTCAGGGTAACAACATGGAGTTTCAATGGCCTAGTCAAAGTTTTAATTGGTTCAATTAA 471 0.3567 MIYGRCAACKSQRRRCPSDCIFSPYFPANDPQRFAYVHRIYGGSNVGKMLQQLPHYVREQAANTLYLEAQCRIQDPVYGCVGIISKLYQQIHDTEVELAKIQTQIACHKNKNSRVEVQSNFNILSTIDAESNLNFLPPQGNNMEFQWPSQSFNWFN 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02048 156 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Car02g02048 156 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 116 - -
Car02g02048 156 Coils Coil 84 111 - -
Car02g02048 156 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Car02g02048 156 PANTHER LOB DOMAIN-CONTAINING PROTEIN 23-RELATED 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02048 Car-Chr2 50929948 50930891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02048 5 121 AS2 family AT3G26620 61.538 3.34e-48 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car02g02048 LOB 5.7e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02048 - - lang:109328513 236.113