Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car02g02040 | ATGGCTATTACCATCCCTTCTTCAACTAAGTGGTTTTCTGAAACATTAGAAGCAGTGACAAAGTTCAAAGAAATTCTTTCTTTGAGAGTGTGGAAAGTCATTGATTGTTCTGCAGTTGAGAAATTTGTGAATGTTATGAAGAGAGTTCTTTTTGCTGCATTCACCTTCATTTTAGCACTAGGAGGATCGATGATAGGAACAATAGCAGGAGCTATTAAAGGACAAACAACAGAAGCTGGTTTTCTTGATGGAGCTGGAAAAGGAGCAATTGCAGGGGCCATTGCAGCCATTGAATTGATGAGTTTTGCTTCTCTTTGTGAGCCATTTTCTAAGGTTGCTCTGTTGAGAAGTTTATTAAATGGCAAATTGTTTGTGGAATGGATATGTCCAACTGTTGCACAAGCTTATTTGTTTTATATTAATTCGTTAGAATCAACATTTGGAGAAATGTTTTCAGACATTCATGATAGTATGGGAGTTAAGGGGATGCCACAAAGTTGTATTATGAAACTTCCATTTCACAAATTTAACTCCAATAAAATGATGAAACTATACAGGGAGTCTTGTTGCTCAATTTGCTTCCAGGATTTTGAAGATGGAGAGTTGGTGAGAATTCTTCCAAAATGTTGTCACATTTTTCATTTAGAATGCATTGACAAGTGGCTTATCCAACAAGGATCATGTCCCATGTGTAGAGCTAGAACTTACGTTCCTAACCACAATCTTAATGAATAG | 735 | 0.3646 | MAITIPSSTKWFSETLEAVTKFKEILSLRVWKVIDCSAVEKFVNVMKRVLFAAFTFILALGGSMIGTIAGAIKGQTTEAGFLDGAGKGAIAGAIAAIELMSFASLCEPFSKVALLRSLLNGKLFVEWICPTVAQAYLFYINSLESTFGEMFSDIHDSMGVKGMPQSCIMKLPFHKFNSNKMMKLYRESCCSICFQDFEDGELVRILPKCCHIFHLECIDKWLIQQGSCPMCRARTYVPNHNLNE | 244 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car02g02040 | 244 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 151 | 236 | IPR013083 | - | |
Car02g02040 | 244 | SUPERFAMILY | RING/U-box | 183 | 238 | - | - | |
Car02g02040 | 244 | CDD | RING-H2_PA-TM-RING | 189 | 232 | - | - | |
Car02g02040 | 244 | ProSiteProfiles | Zinc finger RING-type profile. | 190 | 232 | IPR001841 | - | |
Car02g02040 | 244 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 18 | 234 | - | - | |
Car02g02040 | 244 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 18 | 234 | IPR044523 | - | |
Car02g02040 | 244 | SMART | ring_2 | 190 | 231 | IPR001841 | - | |
Car02g02040 | 244 | Pfam | Ring finger domain | 190 | 232 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car02g02040 | Car-Chr2 | 50858201 | 50860866 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car02g02040 | 43 | 232 | C3H Transcription Factor Family | AT5G66070 | 37.500 | 2.25e-37 | 129 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car02g02040 | - | K19041 | gmx:100305612 | 276.174 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Car02g02040 | 02 | 50858201 | 50860866 | Car02g02040 | 02 | 50858201 | 50860866 | ECH |