Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02039 ATGGAAGGTGTTGTTGTGAGAAGGGTCATTCCTTCTGATAATAGTTGTTTGTTTAATGCAGTTGGATATGTTATGGATCGTGACCAATCCAAAGCTGCTGAGTTGAGACAGGTTATAGCTGCAACAGTAGCAAGCGATTCCGAGAAATATAGTGAAGCATTTCTTGGGAAGCCAAATGCAGTGTATTGTAATTGGATTCTCGACTCAGAGAAGTGGGGAGGTGCAATTGAACTTTCAATACTAGCAGATTATTATGGACGTGAAATTGCAGCGTATGATATCCAGACAACACGATGTGATCTGTACGGTCAGGAAGGTAACTATTCTGAAAGGGTAATGCTGATTTATGATGGTCTCCACTACGATGCTTTAGCTATGTCTCCTGTCGAAGGTGCTCCCGAGGATTTCGATCAGACCATATTTGCTGTACAAAAAAACAGAAGCATTGGACCTGTCGAGGAGCTTGCTCTAAATTTTGTTAAGGACCAACACAGGAAACGAAGATTTACCGACACTGCCAGCTTCACTCTGCGCTGTGGCGTATGCCAAATTGGAGTTATCGGGCAAAAGGAGGCAGTAGAGCATGCTCAAGCAACCGGTCATGTTAACTTTCAAGAATATAGATGA 627 0.429 MEGVVVRRVIPSDNSCLFNAVGYVMDRDQSKAAELRQVIAATVASDSEKYSEAFLGKPNAVYCNWILDSEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQEGNYSERVMLIYDGLHYDALAMSPVEGAPEDFDQTIFAVQKNRSIGPVEELALNFVKDQHRKRRFTDTASFTLRCGVCQIGVIGQKEAVEHAQATGHVNFQEYR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02039 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Car02g02039 208 PANTHER UBIQUITIN THIOESTERASE OTU1 6 206 - -
Car02g02039 208 Gene3D - 1 173 - -
Car02g02039 208 SUPERFAMILY Cysteine proteinases 8 124 IPR038765 -
Car02g02039 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 6 206 IPR039138 GO:0004843|GO:0016579|GO:0030433|GO:0101005
Car02g02039 208 Pfam OTU-like cysteine protease 12 107 IPR003323 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02039 1 208 C2H2 Transcription Factor Family AT1G50670 81.250 3.84e-129 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02039 K13719 - gmx:100793701 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02039 02 50844342 50846934 Car02g02039 02 50844342 50846934 ECH