Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02028 ATGAGATCCTTGAACACCTCACCTTTTTCTAGTTCATCTCGATGCTTTTTGCAACAAATTTTTATTTCATATGTTTCTATCTTACTCATAGTGGTCAGCACTGGTGGCTTTAAAAAGGTGATTGCATCTCGTCGCCTTGTTGAAGTGAATCACCAAGATTATCCTACATGGTTTTCTACTGATGATCGTATCTTGTTGTCTGAGCTCCGAAAAGGTCTAGCTCGACCAAACACCATTGTGGCCAATGATGGCAGTGGCCAATATAAAACGGTTGCAGCCGCTATTAACTCGTACCCTGAAAATCATCAAGGAAGATATGTTATATATGTTAAAATGGGTATCTACCATGAGTATGTAACTATTGGCGATGAAAAAAGAAAAATTTTACTATACGGTGATGGCCCTACAAACACAATTATCACTGGAAACAAGAACGTTCGGAGTGGACTCCATACACCCGAAACAGCCACATTTACCACCTTTGGTGAAGACTTCATTGCCCTGTCAATTGCCTTTGAGAATAAAGCTGGTCCAGAAGCTCAACAAGCAGTAGCACTTCGTGTTGAAGGTGATCGCTCAGTATTCTTCCGGTGTGCATTTCTTGGTTATCAAGACACATTGTACACAAGCAACGGTCGTCAATTTTACCGTAACTGTGAGATTTATGGAACCATTGATTTTATCTTTGGGAAGTCGGGTACTACCTTGATTCAGAACTCTAAGATCTTGGTAAGGAAGCCCATTCAAGGACAACAAAATGTTGTGGTGGCAGATGGGTCATACGACAAGGACAAGCACACTGGAATAGTTCTCCAAAACTGCTCCATCATGCCAGACATTGAGCTATATCCTTATCGGTTTACAGTGAAGACTTACTTGGCAAGGCCATGA 891 0.413 MRSLNTSPFSSSSRCFLQQIFISYVSILLIVVSTGGFKKVIASRRLVEVNHQDYPTWFSTDDRILLSELRKGLARPNTIVANDGSGQYKTVAAAINSYPENHQGRYVIYVKMGIYHEYVTIGDEKRKILLYGDGPTNTIITGNKNVRSGLHTPETATFTTFGEDFIALSIAFENKAGPEAQQAVALRVEGDRSVFFRCAFLGYQDTLYTSNGRQFYRNCEIYGTIDFIFGKSGTTLIQNSKILVRKPIQGQQNVVVADGSYDKDKHTGIVLQNCSIMPDIELYPYRFTVKTYLARP 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02028 296 ProSitePatterns Pectinesterase signature 2. 221 230 IPR033131 -
Car02g02028 296 PANTHER PECTINESTERASE 44 296 - -
Car02g02028 296 PANTHER PECTINESTERASE 44 296 - -
Car02g02028 296 Gene3D - 73 296 IPR012334 -
Car02g02028 296 Pfam Pectinesterase 78 296 IPR000070 GO:0030599|GO:0042545
Car02g02028 296 SUPERFAMILY Pectin lyase-like 75 296 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02028 Car-Chr2 50746899 50748766 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02028 3 296 Carbohydrate Esterase AT2G26450 44.218 5.12e-79 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02028 K01051 - gmx:100808559 332.413