Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02027 ATGAGATCCTTGAACACCTCACCTTTTTCTAGTTCATCTCGATTCTTTTTGCAACAAGTTTTTATTTCATATGTTTCTATCTTACTCATAGTGGTCAGCAGTGGTGGCTTTAAAAAGGTGATTGCATCTCGTCACCTTGTTGAAGTGAATCACCAAGATTATCCTACATGGTTTTCTACTGATGATCGTATCTTGTTGTCTGAGCTCCGAAAAGGTCTAGCTCGACCAAACACCATTGTGGCCAATGATGGCAGTGGCCAATATAAAACGGTTGCAGCCACTATTAACTCGTACCCTAAGAATCATCGAGGCAGATATGTTATATATGTTAAAATGGGTGTCTACCGTGAGTATATAACTATTGGCGCTGAAAAAAGAAAATTTTTACTATACGGTGATGGCCCTACAAACACAAGTATCACTGGAAACAAGAACGTTCAGAGTGGACTCCATACACCCGAAACAGCCACATTTAACTTCATTGCCCTGTCAATTGCCTTTGAGAATGAAGCTGGTCCAAAAGCTCAACAAGCAGTAGCACTTCGTGTTGAAtACACATTGTACACAAACAGGGGTCGTCAATTTTACCGTAACTGTGAGATTTATGGAACCATTGATTTTATCTTCGGGGAGTTGGGTACTACCTTGATCCAGAACTCTAAGATCTTGGTAAGGAAACCCATTCAAGGACAACAAAATGTTGTGGTGGCAGATGGGTCATACGACAAGGACGGGCACAGTGGAATAGTTCTCCAAAATTGCTCCATCATGCGAGACATTGTGCTATATCCTTATCGGTTTACAATGAAGACTTACTTGACAAGGTCATGGAAAGCTTTTTCAAGGGCGGTCTTCATTAACAATTATTTTGATGATTATATTCAACGAGATGGATATATGATATGGAAACCTAATGAAACAAACACTGAAAACTCGTACTTCGTTGAGTTTGGAAATATTGGACCTGGTGCCAATGCTACATCAAGAGTTAAATGGGCAAAAGGTGTCATTACCAAAGAGGAAGCTGTTAGATTTACTACTGAACCATAA 1050 0.3981 MRSLNTSPFSSSSRFFLQQVFISYVSILLIVVSSGGFKKVIASRHLVEVNHQDYPTWFSTDDRILLSELRKGLARPNTIVANDGSGQYKTVAATINSYPKNHRGRYVIYVKMGVYREYITIGAEKRKFLLYGDGPTNTSITGNKNVQSGLHTPETATFNFIALSIAFENEAGPKAQQAVALRVEYTLYTNRGRQFYRNCEIYGTIDFIFGELGTTLIQNSKILVRKPIQGQQNVVVADGSYDKDGHSGIVLQNCSIMRDIVLYPYRFTMKTYLTRSWKAFSRAVFINNYFDDYIQRDGYMIWKPNETNTENSYFVEFGNIGPGANATSRVKWAKGVITKEEAVRFTTEP 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02027 349 Gene3D - 73 349 IPR012334 -
Car02g02027 349 PANTHER PECTINESTERASE 44 349 - -
Car02g02027 349 ProSitePatterns Pectinesterase signature 2. 201 210 IPR033131 -
Car02g02027 349 PANTHER PECTINESTERASE 44 349 - -
Car02g02027 349 Pfam Pectinesterase 78 348 IPR000070 GO:0030599|GO:0042545
Car02g02027 349 SUPERFAMILY Pectin lyase-like 75 347 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02027 Car-Chr2 50723991 50733698 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02027 3 349 Carbohydrate Esterase AT2G26450 36.957 9.24e-75 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02027 K01051 - gmx:100808559 355.91