Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02006 ATGGAATCCAACTTACTCTTTCTTCTACTTCTGTTTGGTTCATTGATTTTTATGTCACACTTGGCTTTAGCTTCCACACCTAAGCTCAACATTCAAGAGGTAAAGGCATTGAAGGAGATAGCAAACAAAATTGGGAAAAAAGATTGGGACTTTGGAGTGGACCCTTGCAGTGGAAAAGGAAATTGGAATGCTTCTAATAAGAAAGGATTTGAGAGTTTTGTGATTTGTGATTGTTCATTCAACCACAATTCTTCTTGTCATGTTGTAAGCATATCCTTGAAGGCTCAAAATCTATCTGGTAGTCTCTCACCAGAGTTTTCCAAGCTCCATCATCTCAGATTATTGGATCTTAGTCGTAATATTATCACCGGTTCTGTACCTCAACAATGGTCTACCATGAACTTGGTTGAGTTATCTTTGATGGGAAACAGTTTATCAGGTCCATTCCCCAAAGTTCTCACCAATATTACAACCCTAAAAAATATAAGTATTGAAGGAAATCTATTTTCAGGCTTCATTCCAACAGAGATTGGAAAATTGATCAATTTAGAAAAACTCATTATGTCATCAAATGGATTCACAGGACCATTGCCATCTTCACTTTCCAAGTTGACCAAGTTGAATGATTTGAGGATATGTGACAATAATTTATCTGGAAAGATACCTGATTTCATTAGTAAATGGGAATTGATTGAAAAATTGCACATTCAAGGTTGCTCTCTTGAGGGGCCAATACCTACCAGCATTTCTGTCTTGACAAGATTAAGTGATTTGAGGATAACTGATTTGAAAGGTAGTAGAAGCTCTACTTTTCCACCACTAAGTAATATGAAATCCATGAAGACACTGGTTCTAAGAAAATGCTTGATTAAAGGAGAGATACCAGAATATATTGGAGGAATGGAAAAATTGAAAATCTTAGATTTGAGTTTCAATAGCTTGAGTGGAAAGATACCTGAATCTTTTGACCAGCTTGATAAAGTGGACTTCATGTATCTTACTGCAAACAACATATCAGGAACTATACCTAGCTGGGTTCTTGGAAATAACAAAAATGTTGATGTCTCTTACAATAATTTTGCATGGGATAGCTCAAGTCCAACCGAATGTCAACGAGGGAGCGTAAACCTTGTCGAAAGCTACTCTTTATCTGCATCTAAAAAAAGTAACATTCATTCATGCCTAAAAAGAAACTTCCCGTGCGCATCGGATAATCCAAGTAATTCCTTCTTGCGCATTAATTGTGGTGGTAATGAAGCAAATATTAATGGTGAAATTTATGAAGCTGACATAGAACGAAAAGGCGCCTCAATGTTATATTACACTGGTCAAGATTGGGCTCTTAGCAGCACAGGGAACTTCATGGACAATGATATTGATTCTGATCCCTATATTGTGGCCAATACTTCTAAACTTCTTAATACATCTGTTCTCAATTCAAAATTGTACACAACAGCTCGTGTTTCTCCGCTTTCCCTCACATACTATGGCCTCTGCTTGATAAATGGAAATTACACTGTTAAGCTTCATTTTGCAGAGATTATTTTCATCAATGATAGGTCACTAAATAGTCTTGGGAGGCGAATATTTGATGTCTACATCCAGGGAAAATTGATGCTAAGAGACTTTGATATTCAAAGAGAAGCTGGTGGTACTGGAAAGCCTATTGTGAAGACATTTAATGCTACTGTCACAGAGAATACACTAAAAATTCAATTCTACTGGGCTGGAAAAGGAACTACTGGTATACCAACAAGAGGAGTTTATGGTCCTTTAGTGTCTGCTATTTCAGTGCATTCTAATTTTAAACCTCCATCAGATCATCGCAAGAAAAATCATGTGATATTGGTAGTTGGCATAGTCAGTAGTGTTCTAGTTGTTGTCCTTATGGTGTTGTGTCTCATGAGGAGGTATGGATTGTTAGGAGGCAAGGACTCAGTGTATAAAGAGCTTAGAGGTATAGATCTGCAAACAGGATTGTTCACTTTAAGACAAATAAAAGCAGCTACAAAAAACTTTGATGCTACAAATAAACTTGGCGAAGGTGGCTTTGGTTCTGTTTACAAGGGCATACTCTCAGATGGCACAGAAATTGCAGTGAAACAGCTCTCATCAAAGTCTAAGCAAGGAAACCGCGAGTTTGTGACAGAGATAGGAATGATATCTGGACTTCAACATCCAAACCTTGTTAAGCTTTTTGGATGTTGTGTGGAAGGGAACCAACTAATACTGATCTATGAGTATATGGAAAATAATTGTCTATCCCGCATTCTTTTTGGAAAAGGATCGGACAATAAAACAAAACTGGACTGGCTTACCAGGAAGAAAATTTGTCTTGGTATAGCTAAAGCTTTGGCTTATCTCCATGAAGAGTCTAGAATTAAAATCATACATAGGGATATAAAGGCAAGTAATGTGTTGTTGGACAAGGAATTTAATGCCAAAGTTTCAGATTTTGGTTTGGCCAAACTTATTGAAGATGACAAAACACATGTCAGCACTCGGATCGCAGGAACAATTGGTTATATGGCTCCTGAGTATGCAATGCGTGGTTACTTaactgacaaagcagatgtttatagctttggcgtggttgcattggaaactataagtggaaaaagTAATACAAATTACAGACCAGATGATGAATTTTTTTACTTACTTGATTGGGCATATGTTTTACAAGAAAGAGGAACTCTTATGGCGCTAGTTGATCCAGATTTGGGATCAGAATATTCAACTGAGGAAGCCATGGTAATGCTAAATGTGGCACTCTTGTGTACTAATGCATCTCCTACGCTTAGGCCAACAATGTCACAAGTTGTAAGCATGCTTGAAGGTTGGACTGACATTCAGGATCTTCTTTCTGATCCCGGATATTCAGCTGTTAGTTCAAGTTCCAAATATAATAAGAGCATAAGAAATCACTTCTGGGAGAATACAAACAGAACACAAAGCATGTCAATACCTACTATATATACTGATTCCTCTAGCTCGTATGTTCAAACTGACGAGAGCCATTGTCTTGTAAAAATTAACTCAGATAGATCAGAGATATGA 3060 0.3644 MESNLLFLLLLFGSLIFMSHLALASTPKLNIQEVKALKEIANKIGKKDWDFGVDPCSGKGNWNASNKKGFESFVICDCSFNHNSSCHVVSISLKAQNLSGSLSPEFSKLHHLRLLDLSRNIITGSVPQQWSTMNLVELSLMGNSLSGPFPKVLTNITTLKNISIEGNLFSGFIPTEIGKLINLEKLIMSSNGFTGPLPSSLSKLTKLNDLRICDNNLSGKIPDFISKWELIEKLHIQGCSLEGPIPTSISVLTRLSDLRITDLKGSRSSTFPPLSNMKSMKTLVLRKCLIKGEIPEYIGGMEKLKILDLSFNSLSGKIPESFDQLDKVDFMYLTANNISGTIPSWVLGNNKNVDVSYNNFAWDSSSPTECQRGSVNLVESYSLSASKKSNIHSCLKRNFPCASDNPSNSFLRINCGGNEANINGEIYEADIERKGASMLYYTGQDWALSSTGNFMDNDIDSDPYIVANTSKLLNTSVLNSKLYTTARVSPLSLTYYGLCLINGNYTVKLHFAEIIFINDRSLNSLGRRIFDVYIQGKLMLRDFDIQREAGGTGKPIVKTFNATVTENTLKIQFYWAGKGTTGIPTRGVYGPLVSAISVHSNFKPPSDHRKKNHVILVVGIVSSVLVVVLMVLCLMRRYGLLGGKDSVYKELRGIDLQTGLFTLRQIKAATKNFDATNKLGEGGFGSVYKGILSDGTEIAVKQLSSKSKQGNREFVTEIGMISGLQHPNLVKLFGCCVEGNQLILIYEYMENNCLSRILFGKGSDNKTKLDWLTRKKICLGIAKALAYLHEESRIKIIHRDIKASNVLLDKEFNAKVSDFGLAKLIEDDKTHVSTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALETISGKSNTNYRPDDEFFYLLDWAYVLQERGTLMALVDPDLGSEYSTEEAMVMLNVALLCTNASPTLRPTMSQVVSMLEGWTDIQDLLSDPGYSAVSSSSKYNKSIRNHFWENTNRTQSMSIPTIYTDSSSSYVQTDESHCLVKINSDRSEI 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02006 1019 SUPERFAMILY L domain-like 75 360 - -
Car02g02006 1019 Gene3D - 407 602 - -
Car02g02006 1019 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE-RELATED 65 965 - -
Car02g02006 1019 SUPERFAMILY Protein kinase-like (PK-like) 657 971 IPR011009 -
Car02g02006 1019 Gene3D Ribonuclease Inhibitor 30 264 IPR032675 -
Car02g02006 1019 CDD STKc_IRAK 679 947 - -
Car02g02006 1019 Gene3D Ribonuclease Inhibitor 265 394 IPR032675 -
Car02g02006 1019 ProSitePatterns Protein kinases ATP-binding region signature. 679 701 IPR017441 GO:0005524
Car02g02006 1019 Pfam Protein tyrosine and serine/threonine kinase 676 945 IPR001245 GO:0004672|GO:0006468
Car02g02006 1019 Gene3D Phosphorylase Kinase; domain 1 644 748 - -
Car02g02006 1019 Gene3D Transferase(Phosphotransferase) domain 1 749 957 - -
Car02g02006 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 796 808 IPR008271 GO:0004672|GO:0006468
Car02g02006 1019 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 65 965 - -
Car02g02006 1019 Pfam Malectin domain 411 596 IPR021720 -
Car02g02006 1019 ProSiteProfiles Protein kinase domain profile. 673 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g02006 1019 SMART serkin_6 673 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g02006 1019 Pfam Leucine rich repeat 279 338 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02006 Car-Chr2 50492470 50501035 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02006 210 1010 Receptor kinase-like Gene Family AT1G07650 63.054 0.0 990
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car02g02006 PK_Tyr_Ser-Thr 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02006 - - gmx:100784864 1634