Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02000 ATGGAAACCAAGAAGCTTCAGTCTCGATTCTCACTAGGCAGACAATCCTCGCTGGCACCTGATCGCGAAGATTCCTCTACCGTCGACGAGTCGGCATCTGAGGCGGTGGATCCTCCGGTTCGATTGATGTATTTGGCAAACGAAGGGGACTTAGAAGGAATCAACGAGCTTTTAGACGGAGGTAGTGACGTCAATTTCAGAGACATTGACGGCCGCACCGCTCTCCACATCGCCGCCTGTCAAGGCCGAACAGACGTCGTCCAATTGTTGCTCCAAAGAGGTGCTGAAGTTGATCCTCAAGATCGATGGTGCAGCACCCCTCTTGGAGATGCATTGTACTACAAAAATCATGATGTTGTCAAACTTTTGGAGCAACACGGTGCCAAACCCCCGGTGGCTCCGATGCATGTCGAGAATGCCCGCGAAGTCCCAGAATATGAGATTGATCCTTCTGAACTTGATTTTACAAATAGTGTTTGCATAACAAAGGGAACATTCCGGAGAGCATTATGGCGTGGAATTCAAGTAGCTGTTAAAACTCTTGGGGAGGAAGTGTTCACAGATGACAATAAAGTAAAAGCATTTCATGATGAGCTTACATTACTTCAGAAAGTAAGGCATCCAAATGTTGTCCAATTTTTGGGTGCTGTGACACAATGCACTCCAATGATGATTGTCACAGAATATCTACCCCAGGGGGATCTTCGTGCCTACTTGAAGCGGAAAGGTGCATTAAAACCAATAATAGCTGTGAAGTTTGCACTTGATATTGCTAGGGGAATGAACTATTTGCATGAACATAAACCTGAAGCCATTATACACCGAGATCTTGAACCTTCAAATGTTCTCCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGTTGCTCAAAGTCACTAAAACAGTCAAAGAAGACAAACCAGTGACATGCCAGGATTCATCATGGCGGTATGTTGCACCAGAAGTCTACAGAAATGAGGAATATGATACCAAAGCAGATGTGTTTTCCTTTGCTCTGATATTACAAGAGATGATTGAAGGTTGTCCACCATTTTATAGAAAGCCAGAAAATGAAGTTCCTAAAGCATACGTGGAAAATATGCGTCCACCATTTAAGGCTTCACCTAAGCTTTATGCTTATGGATTAAAAGAGTTAATTGAGGAATGTTGGGATGGAGAACCATACAGAAGACCAGCATTTAGGCAAATAATTGAGAGGTTGGATAAGATCACCCACCATCTTGCTCAAAAGAGGCACTGGAAGGCTCTGACTCCTGCATGCATCCGGAATCTAGAGGCCTTGTTTAAGAGGTATCCTACAAGTCCTGGTAGTCGATCATCTCGCTCAACTGTTAGATAA 1374 0.4425 METKKLQSRFSLGRQSSLAPDREDSSTVDESASEAVDPPVRLMYLANEGDLEGINELLDGGSDVNFRDIDGRTALHIAACQGRTDVVQLLLQRGAEVDPQDRWCSTPLGDALYYKNHDVVKLLEQHGAKPPVAPMHVENAREVPEYEIDPSELDFTNSVCITKGTFRRALWRGIQVAVKTLGEEVFTDDNKVKAFHDELTLLQKVRHPNVVQFLGAVTQCTPMMIVTEYLPQGDLRAYLKRKGALKPIIAVKFALDIARGMNYLHEHKPEAIIHRDLEPSNVLRDDSGHLKVADFGVSKLLKVTKTVKEDKPVTCQDSSWRYVAPEVYRNEEYDTKADVFSFALILQEMIEGCPPFYRKPENEVPKAYVENMRPPFKASPKLYAYGLKELIEECWDGEPYRRPAFRQIIERLDKITHHLAQKRHWKALTPACIRNLEALFKRYPTSPGSRSSRSTVR 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02000 457 SUPERFAMILY Protein kinase-like (PK-like) 161 421 IPR011009 -
Car02g02000 457 CDD STKc_MAP3K-like 161 412 - -
Car02g02000 457 PRINTS Ankyrin repeat signature 71 86 IPR002110 GO:0005515
Car02g02000 457 PRINTS Ankyrin repeat signature 119 133 IPR002110 GO:0005515
Car02g02000 457 ProSiteProfiles Protein kinase domain profile. 155 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g02000 457 Pfam Protein tyrosine and serine/threonine kinase 170 412 IPR001245 GO:0004672|GO:0006468
Car02g02000 457 ProSiteProfiles Ankyrin repeat profile. 70 102 IPR002110 GO:0005515
Car02g02000 457 PRINTS Tyrosine kinase catalytic domain signature 227 240 IPR001245 GO:0004672|GO:0006468
Car02g02000 457 PRINTS Tyrosine kinase catalytic domain signature 266 284 IPR001245 GO:0004672|GO:0006468
Car02g02000 457 PRINTS Tyrosine kinase catalytic domain signature 337 359 IPR001245 GO:0004672|GO:0006468
Car02g02000 457 PRINTS Tyrosine kinase catalytic domain signature 383 405 IPR001245 GO:0004672|GO:0006468
Car02g02000 457 ProSiteProfiles Ankyrin repeat region circular profile. 70 102 - -
Car02g02000 457 SMART ANK_2a 37 66 IPR002110 GO:0005515
Car02g02000 457 SMART ANK_2a 103 132 IPR002110 GO:0005515
Car02g02000 457 SMART ANK_2a 70 99 IPR002110 GO:0005515
Car02g02000 457 Gene3D - 3 144 IPR036770 -
Car02g02000 457 PIRSF ILK 2 434 - -
Car02g02000 457 MobiDBLite consensus disorder prediction 8 22 - -
Car02g02000 457 SUPERFAMILY Ankyrin repeat 42 133 IPR036770 -
Car02g02000 457 Pfam Ankyrin repeats (3 copies) 42 130 IPR002110 GO:0005515
Car02g02000 457 Gene3D Transferase(Phosphotransferase) domain 1 154 421 - -
Car02g02000 457 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 440 - -
Car02g02000 457 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 10 440 - -
Car02g02000 457 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02000 Car-Chr2 50458853 50465463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02000 1 435 MAP Kinase Kinase Kinase AT4G18950 65.227 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Car02g02000 PK_Tyr_Ser-Thr 3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02000 - - gmx:100795964 754.977