Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01987 ATGTTTGGTGAAATGGAACACAAGCAAGAACAAGACAATGATAACCAGAATCATATGTCTGGTATTGATGTTACATTAATATCTCCTAAAGTTCCAAAATCTGTTTCACCAGTTTCTTCTGCAGCCGAGGGGGAAACCTTAAAGCGGCCACGCGGACGCCCAGCAGGTTCCAAAAACAAGCCTAAGCCGCCAATTATTGTCACTAGAGATAGTGCTAATGCACTTAAAGCTCATGCTATGGAAGTGAGTTCTGGCTGTGATGTGAATGAGAGTTTGTTAAACTTCGCAAGGAGAAAGCAACGTGGTCTTTGCATACTTAATGGCACTGGTTGTGTGACAAATGTAACGCTGCGCCAACCGGCTTCATCTGGTGCCATTGTGACTCTTCATGGTCGATTCGAGATTCTCTCGTTGTTGGGGTCGATTCTCCCCCCACCAGCACCACCAGGAATCACTGGTTTGACAATTTATTTAGCAGGTGCTCAAGGACAAGTTGTTGGAGGTGCTGTGGTTGGTGCTTTGATTGCTTCAGGACCTGTTGTGATCATGGCTGCGTCATTCATGCACGCCACTTTCGATCGTCTGCCGCTGGAAGACGATGAACTTGCTGCTGCAATGCAGAATCAGCATTACCAAAATGGACGCACGCATCATCTCGATATCTCTGACTTATATGCAATGCCGCAGAACCTCCTCATGAATGGTGCAATGCCTCCTGAGATTTACTCCTGGGCACCAGGGCGAAACTTGTCAAAAACCTGA 762 0.4672 MFGEMEHKQEQDNDNQNHMSGIDVTLISPKVPKSVSPVSSAAEGETLKRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARRKQRGLCILNGTGCVTNVTLRQPASSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALIASGPVVIMAASFMHATFDRLPLEDDELAAAMQNQHYQNGRTHHLDISDLYAMPQNLLMNGAMPPEIYSWAPGRNLSKT 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01987 253 PIRSF ESCAROLA 2 247 IPR014476 GO:0003680
Car02g01987 253 Gene3D - 74 218 - -
Car02g01987 253 Pfam Plants and Prokaryotes Conserved (PCC) domain 77 187 IPR005175 -
Car02g01987 253 CDD DUF296 78 158 IPR005175 -
Car02g01987 253 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 10 252 - -
Car02g01987 253 SUPERFAMILY AF0104/ALDC/Ptd012-like 72 204 - -
Car02g01987 253 MobiDBLite consensus disorder prediction 1 66 - -
Car02g01987 253 ProSiteProfiles PPC domain profile profile. 72 210 IPR005175 -
Car02g01987 253 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 10 252 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01987 Car-Chr2 50351593 50352354 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01987 31 252 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 75.000 9.69e-106 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01987 - - gmx:100804941 411.764