Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01985 ATGCATGAGCCTCTCCTCACCCTTTTCTCCACTAAAGGAGAAACACAGTCACCAAGTAAACCATTACTCAATCAACAACAACCTTTCCATGACCTTGTTCCCTCCCCAACACTATCTCAATCAAGTTCTTCTCATGTCATCAATGAATCCAAAAACACTTCTTGTATTAACCTCATAGCGAACTTAAGCATCGTGAAAGGGAAGATTACTCATCGATCCCGCTCTGCTCCATCCTTATTTTTCACCGACATGAGAGTGGATTTTCATGAGCCTTTTGAACATAGTCATGCACATAAGTCGTCAAGTTTAATAGTTAGACTATCTTTCACTATTGTTTTCTTGTATGTGGCTATTGGGGTTACAGTGTACATGATAAGTGGGAGTTTCAAAGGAACTACTACATTCAGGCCTGTTGATGCTGTGTACTTTACAATGGTAACTCTATGCACTATAGGGTATGGAGATATTGTTCCTGATACCATGTTTACAAAGATGTTTACATGTGGTTTCATTTTGGTGGGTTTTGGATTTATTGGTTTTATGCTTAATGAATTGGTTGTATACATTTGTGATACAAATGAGGCATTCTTATTAAGCATGATGGATGAAGATAGATACAAGAAAATTCTTAGGACTTATATGGTTGATGAAGAGAAAAGAAGAATGAGAATAAGAACCAAAGTTTGTGTTGCTTTGATTGTTGTTATTGTCTGCATTGCTATTGGAACAGTTACAGCACACTTTGTAGAGGATATGAGTTGGGCTGATAGTTTTTATCTCTCCATTACTTCGGTTACATCGGTTGGTTACGGAGATCGTTCTTTCAGAACTTTAACTGGAAGATGTTTTGCGATTCTGTGGCTTTTGGTAAGCACGTTGGCAGTTGCAAGGGCGTTTCTATACCTCACTGATTATAGTATGCAAAAGAGAAGCCGCGAGATGGCAAAAAGGGTTCTTCAGAAGAAGATAACCTTATCTGATTTGGCGGCTGCAGACCTTGATAATGATGGATCAATCAGTAAGTCTGAATTTGTCATATACAAGCTTAAGCAAATGGGGAAGATTACTGAGATAGACATTCTGCAAATTAGCAAACAATTTGATTCCTTGGACCATGGCGCATATGGGAAGATAACTCTAGCTGACCTCATGGAAACTGTCTAA 1164 0.384 MHEPLLTLFSTKGETQSPSKPLLNQQQPFHDLVPSPTLSQSSSSHVINESKNTSCINLIANLSIVKGKITHRSRSAPSLFFTDMRVDFHEPFEHSHAHKSSSLIVRLSFTIVFLYVAIGVTVYMISGSFKGTTTFRPVDAVYFTMVTLCTIGYGDIVPDTMFTKMFTCGFILVGFGFIGFMLNELVVYICDTNEAFLLSMMDEDRYKKILRTYMVDEEKRRMRIRTKVCVALIVVIVCIAIGTVTAHFVEDMSWADSFYLSITSVTSVGYGDRSFRTLTGRCFAILWLLVSTLAVARAFLYLTDYSMQKRSREMAKRVLQKKITLSDLAAADLDNDGSISKSEFVIYKLKQMGKITEIDILQISKQFDSLDHGAYGKITLADLMETV 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01985 387 PRINTS Two pore domain K+ channel signature 146 174 IPR003280 GO:0005267|GO:0016020|GO:0071805
Car02g01985 387 PRINTS Two pore domain K+ channel signature 266 275 IPR003280 GO:0005267|GO:0016020|GO:0071805
Car02g01985 387 PANTHER OS01G0696100 PROTEIN 52 382 - -
Car02g01985 387 SUPERFAMILY Voltage-gated potassium channels 91 189 - -
Car02g01985 387 SUPERFAMILY EF-hand 328 385 IPR011992 -
Car02g01985 387 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 52 382 IPR003280 GO:0005267|GO:0016020|GO:0071805
Car02g01985 387 MobiDBLite consensus disorder prediction 9 26 - -
Car02g01985 387 SUPERFAMILY Voltage-gated potassium channels 204 322 - -
Car02g01985 387 MobiDBLite consensus disorder prediction 1 26 - -
Car02g01985 387 Pfam Ion channel 111 187 IPR013099 -
Car02g01985 387 Pfam Ion channel 233 305 IPR013099 -
Car02g01985 387 Gene3D - 294 387 - -
Car02g01985 387 Gene3D - 232 293 - -
Car02g01985 387 Gene3D - 87 193 - -
Car02g01985 387 ProSitePatterns EF-hand calcium-binding domain. 332 344 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01985 Car-Chr2 50340514 50342260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01985 66 385 Ion Channels AT4G18160 49.221 4.35e-110 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01985 K05389 - gmx:100789639 532.332