Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01982 ATGGCtaatgagaataataataataataataatCCTTTCTATAATAACAACCACCATGATGATGATGAACTCATCAACCACACAAACTTTTCATTCTCACAAAATTTTCAAGGATTTGATCCTTCTCATACAAGTTTCAATGACTATTTACATGGTTCTATGGACTATAACACACTCTCAAAAGCCTTTGACTTGTCTTGTTCATCACCTGAAGTGATCTCATCCATTGATGACAACACAAAGAAATCTAGTGGAGGAGATTCATCACTATTAGGGATAAGTGAGACACCAAATTCTTCAGAATCTTCTTCATCTAATGAAGCTGAACCTGTTGTAGAAGAAGATTCAACCAAAAGTAACAAGAAAGATAAGCAGCCAAAAGGGTTTCAAGATGGAGATGAAAAATCTAAGAAAGGAGAAAAGGCTAAAAAGAAAGAGAAAAAGGCAAGAGAGCCAAGGTTTGCATTCTTGACAAAAAGTGAGATTGATCATCTTGAAGATGGCTATAGATGGAGAAAATATGGACAGAAAGCAGTCAAGAATAGTCCATACCCAAGGAGCTATTACAGATGCACAAGTCAGAAGTGCATTGTGAAGAAAAGGGTGGAGAGATCATACCAAGATCCATCTATTGTGATGACAACATATGAAGGACAACACAATCATCATTGTCCAGCTACACTTAGAGGCAATGCTTCCACAATGTTTTCATCACCATCACTCTTTGCTTCTTCCACTTCAATGGCACCAAACTTACACCAAGATTTCCTTTCTCAATTCCTTCCAACTTATACTCAAAGTGATCAACATTTCTTCCACCAACAAAATCTTCTCCAAACTCAACCACAACAACAACAATTTCAACTCCATCATGACTACAATGGTTTGTTGCAAGATTTACTACCATCAACATTCCCTGGAAAACAAGACCCATGA 936 0.3632 MANENNNNNNNPFYNNNHHDDDELINHTNFSFSQNFQGFDPSHTSFNDYLHGSMDYNTLSKAFDLSCSSPEVISSIDDNTKKSSGGDSSLLGISETPNSSESSSSNEAEPVVEEDSTKSNKKDKQPKGFQDGDEKSKKGEKAKKKEKKAREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCIVKKRVERSYQDPSIVMTTYEGQHNHHCPATLRGNASTMFSSPSLFASSTSMAPNLHQDFLSQFLPTYTQSDQHFFHQQNLLQTQPQQQQFQLHHDYNGLLQDLLPSTFPGKQDP 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01982 311 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 22 304 IPR044810 GO:0003700
Car02g01982 311 MobiDBLite consensus disorder prediction 75 152 - -
Car02g01982 311 ProSiteProfiles WRKY domain profile. 160 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g01982 311 MobiDBLite consensus disorder prediction 111 152 - -
Car02g01982 311 PANTHER WRKY TRANSCRIPTION FACTOR 71-RELATED 22 304 - -
Car02g01982 311 SUPERFAMILY WRKY DNA-binding domain 158 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car02g01982 311 MobiDBLite consensus disorder prediction 1 15 - -
Car02g01982 311 Pfam WRKY DNA -binding domain 166 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g01982 311 Gene3D WRKY domain 150 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car02g01982 311 MobiDBLite consensus disorder prediction 75 110 - -
Car02g01982 311 MobiDBLite consensus disorder prediction 1 21 - -
Car02g01982 311 SMART WRKY_cls 165 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01982 Car-Chr2 50324860 50327089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01982 33 311 WRKY Transcription Factor Family AT4G18170 46.207 5.88e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car02g01982 WRKY 6.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01982 - - aprc:113847247 367.466