Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01981 ATGTCATCCAAAAGTTCTTTGGATGTTGAATTGTCAAAGAAGACATCGTTTTTGGGTTTGAAAAGATGGGTTTTGATTGGTATCGGTGTTGGTGCATTTATAGTGCTGATTCTTTGTATATTGTCTATATGGGTGATGTTTCGGAGGAAGTCTAGGAGATTGTTGGACAAGTCCCAAATACCAAATGTGTCAAAAGATATCAATGTTGACAAGGTTGGAAATGTGTTTGTTCCTATTCATGATAATAATTCAGATATGATGTCGGTTCATATGAGGATGGGCAAATTCAGTGATCCTGATAGTGTCAGTCAGTGCAGCGGCAACTCAATTTATCATCACGAGAGAGGATTTAGTTCGCTGTCAGGGGAAGAAGGGAACTCGGGTAATTTCAAGAAGCATCCGACATTGTCAAATGGAGGAGGGCCAATGACTACCTCTCCTTTGATCGGCTTGCCAGAATTTTCTCACCTTGGGTGGGGACATTGGTTTACACTTAGAGATCTCGAACAAGCAACCCGTTGTTTTGCAGCTGAGAACGTTCTTGGTGAGGGTGGATATGGGGTTGTTTACAAGGGTAAACTGATCAATGGAACCGAGGTTGCAGTGAAAAAACTTCTTAACAACTTGGGACAAGCAGAGAGAGAATTCAGGGTTGAAGTGGAGGCTATAGGCCATGTTAGACATAAGCATCTTGTGCGCCTGCTTGGATATTGCGTAGAAGGAGTTCACAGGCTGCTGGTGTATGAATATGTGAACAATGGTAACTTAGAACAATGGTTACATGGGGACAAGTACCAACTTGGGACACTTACCTGGGAGGCCCGCATAAAAGTTATACTAGGCACAGCCAAAGCGCTTGCATATTTACATGAAGCAATAGAACCAAAAGTTATTCACCGGGATATAAAGTCCAGCAACATATTGATCGATAAGGAGTTCAATGCAAAGGTTTCTGATTTTGGTTTGGCCAAACTTTTGGATTCAGGAGAAACTTACATAACTACTAGAGTAATGGGAACTTTTGGTTATGTGGCACCAGAATATGCCAATAGTGGTTTGTTAAACGAGAAGAGTGACATTTACAGCTTTGGTGTCCTCCTGCTTGAAGTGGTTACCGGACGGGATCCTGTAGATTATGCGCGTCCTTCTAATGAGGTTAATCTTGTTGAATGGCTCAAGATGATGGTGGGGGCAAGGAGGGCCGAGGATGTTGTGGACTTGAACATTGAAGTTAAACCATCTGCACGCGCTTTGAAGCGTTCCCTTCTGGTTGCACTTAGGTGTATTGATCCAGATGCAGAAAAGAGGCCCAAAATGAGTCAAGTTGTAAGGATGCTTGAAGCTGACGAATATCCTTTCCGAGAGGATCGGAGGAATAGAAAGAGCGTGGCTACCAGCATGGAAATCGAAACAGTCAATGATATTTCTGGTCCATCCAATGCTGAGAAGGCGAGTCATTCTATAAGCTCCGTGCCAGAAACAACTCAAGGATAG 1494 0.4311 MSSKSSLDVELSKKTSFLGLKRWVLIGIGVGAFIVLILCILSIWVMFRRKSRRLLDKSQIPNVSKDINVDKVGNVFVPIHDNNSDMMSVHMRMGKFSDPDSVSQCSGNSIYHHERGFSSLSGEEGNSGNFKKHPTLSNGGGPMTTSPLIGLPEFSHLGWGHWFTLRDLEQATRCFAAENVLGEGGYGVVYKGKLINGTEVAVKKLLNNLGQAEREFRVEVEAIGHVRHKHLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGDKYQLGTLTWEARIKVILGTAKALAYLHEAIEPKVIHRDIKSSNILIDKEFNAKVSDFGLAKLLDSGETYITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEVVTGRDPVDYARPSNEVNLVEWLKMMVGARRAEDVVDLNIEVKPSARALKRSLLVALRCIDPDAEKRPKMSQVVRMLEADEYPFREDRRNRKSVATSMEIETVNDISGPSNAEKASHSISSVPETTQG 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01981 497 ProSitePatterns Protein kinases ATP-binding region signature. 181 204 IPR017441 GO:0005524
Car02g01981 497 PANTHER OS01G0323000 PROTEIN 2 494 - -
Car02g01981 497 MobiDBLite consensus disorder prediction 454 497 - -
Car02g01981 497 Coils Coil 195 215 - -
Car02g01981 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 297 309 IPR008271 GO:0004672|GO:0006468
Car02g01981 497 SMART serkin_6 175 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01981 497 Gene3D Transferase(Phosphotransferase) domain 1 251 465 - -
Car02g01981 497 ProSiteProfiles Protein kinase domain profile. 175 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01981 497 CDD STKc_IRAK 181 447 - -
Car02g01981 497 SUPERFAMILY Protein kinase-like (PK-like) 155 448 IPR011009 -
Car02g01981 497 MobiDBLite consensus disorder prediction 465 497 - -
Car02g01981 497 Pfam Protein kinase domain 177 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01981 497 PANTHER RECEPTOR-LIKE KINASE PLANT 2 494 - -
Car02g01981 497 Gene3D Phosphorylase Kinase; domain 1 157 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01981 Car-Chr2 50317741 50322242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01981 19 449 Trihelix Transcription Factor Family AT1G70460 40.406 2.65e-95 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Car02g01981 Pkinase 4.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01981 - - gmx:100778444 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00901 05 48168735 48172104 Car02g01981 02 50317741 50322242 PCT