Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01967 ATGGATGTGAGCAAGTTACAAAACTCTAATGAGAAAAAAGAAGATGAAGTTGTGCTTCCTGGATTTAGATTCCATCCAACAGATGAAGAGCTTGTTGGATTTTATCTACGACGAAAGGTGGAGAAGAATCCTCTTCGAATTGAACTCATCAAACAAATTGACATCTACAAATATGATCCATGGGATTTACCAAAAACAAGTAATGTGGGGGAGAAAGAATGGTATTTCTTTTGCCTAAGAGGAAGAAAATATAGGAACAGCATAAGGCCAAATAGAGTGACAAAATGTGGATTTTGGAAAGCCACAGGAATTGATAAGCCTATATATTGTGTTAAAGAATCTCATGAATGCATTGGACTCAAGAAATCATTGGTTTACTACCGTGGAAGTGCAGGGAAAGGCACCAAAACTGATTGGATGATGCATGAATTTCGTCTTCCACCCAAAGGAAAAATTAACAATCATGATGTTCAAGAAGCTGAAGTGTGGACGTTATGCCGAATATTCAAAAGAATCCCATCATACAAGAAGTACACACCAAATTTGGAAAAAGACTTGGCAACAACGGTCACTAATTCTTCAAGTTCCAAAACATGCAGCTTAGAATCTGACAACAGCAACAAGCCATACTTGACTTTCAGAGACTCACAAGTTGTTGTTCAACAAAATGAAAGCAAACCATTTATTAATGGACAACTTGACCAAAGCATTAACTACTCATTTTTAAGTCATGTAGCTCATGAAGCTCCAACAACCTTGTCTCACTCATGTTTTTGGAATGATCACAGTGTGGGGGATGATGCTCTTGCAAATGAGAATTGGGATAGTCTCAGATCTGTGGTTCAATTTACCTTTGATTCATCAAAGGTTTATGATGATTGTAAATACTTTAACTAG 897 0.369 MDVSKLQNSNEKKEDEVVLPGFRFHPTDEELVGFYLRRKVEKNPLRIELIKQIDIYKYDPWDLPKTSNVGEKEWYFFCLRGRKYRNSIRPNRVTKCGFWKATGIDKPIYCVKESHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPKGKINNHDVQEAEVWTLCRIFKRIPSYKKYTPNLEKDLATTVTNSSSSKTCSLESDNSNKPYLTFRDSQVVVQQNESKPFINGQLDQSINYSFLSHVAHEAPTTLSHSCFWNDHSVGDDALANENWDSLRSVVQFTFDSSKVYDDCKYFN 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01967 298 ProSiteProfiles NAC domain profile. 18 171 IPR003441 GO:0003677|GO:0006355
Car02g01967 298 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 298 - -
Car02g01967 298 Pfam No apical meristem (NAM) protein 20 146 IPR003441 GO:0003677|GO:0006355
Car02g01967 298 PANTHER - 5 298 - -
Car02g01967 298 SUPERFAMILY NAC domain 13 170 IPR036093 GO:0003677|GO:0006355
Car02g01967 298 Gene3D NAC domain 27 174 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01967 Car-Chr2 50185083 50188016 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01967 8 253 NAC Transcription Factor Family AT1G26870 48.106 7.23e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car02g01967 NAM 1.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01967 - - gmx:100784323 442.58