Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01963 ATGTGTATTGGAAAACTAAATGATCAATTCACAGTTAATGTGACCAACGAGGAAGTAGTGTCTGCCATGCTACCAATGCAAGAGCATTGGCTTCCACTATCAAACCTTGATTTAATTCTTCCCCCTGTTGATGTTGGTGTCTTCTTTTGCTACAATAAACCTATGATTTCTATTAGCACCACCCATAACATTGTGGGGTGTTTGAAAAATTCCTTAGCTCAATCTCTTGTTTCTTATTATGCCTTTGGTGGTGAAGTGGTTACTAACTCCATAGGTGAACCTGAGTTACTTTGTAATAACCGTGGAGTGGATTTTGTTGAAGCTGTTGCTGATGTTGACCTACAATCTCTTAATTTATATAATCCTGATGAAACAATTGAAGGGAAGCTTGTTCCAAAGAAGAAACATGGTGTACTTGCTGTTCAGGTGACTTGGATGAGATGTGGTGGATTAGTAGTGGCATGCACTTTTGACCATCGCATAGCTGACGCTTATTCAACAAACATGTTCCTTGTATCATGGGCCGAAATAGCCAGGCCCAACAACAAGCCCATGAGCCCAACAACACAACCTTGTTTCCGACGCTCACTTCTCACCCCACGACGTCCATCTTCCATCCACCCTTCACTTTATGATATGTATGTACCAATCACGGACCTCCCTCCTCCGCCAGATCCCAAATTCAAATCCGATATTCAAACCGATCAAATTATTAGTCGTATATATTACGTAACAAACGAACAACTCAACAACATGCAATCACTAGCGAACTCAAACAAAACGAATTTGGATCCTCTACAACAGTTGCACTCTAAACTCGAGTCTTTCTCCGCTTTTCTTTGGAAGATGGTTGCGGAAGCTGCTTCAATAGATAACAAAAATGTTATTGCAAAAATAGGAATTGTGGTTGATGGAAGAAAGAGGCTAAGCAATGGTGACAAGAACAAGGAAGAGATTATGAGTTCGTATTTTGGGAACGTGATTTCGATACCCTACGGTGGTAGATCAACGGAGGAGCTGGTTGAAAAGCCGTTAAATTGGGTGGCGGATCAAGTTCATGAGTTTTTGGAGACAACAATGACGGAGGAGCATTTTCTAGGGTTAATTGATTGGGTGGAAGAGCATCGACCAATTCCAGGGTTGGCGAGGATTTATTGCGGTAGCACTAGTGGAGAAGAGGGACCCACTTTTGTAGTGTCTTCTGGACAAAGGTTTCCAGAATCGAAGATAGATTTTGGATGGGGAAAACCATTGTTTGGATCTTATCATTTTCCTTGGGGTGGTGATGCGGGTTATGTTATGCCAATGCCTAGTCCTAAAAGGAATGGTGATTGGTTACTCTACATGCATCTTCCTAAGGGATACTTGCATTTTATGGAGTTTCATGCTCCACACTTCTTTAAACCAATGTCTTGGGATTACCTTCTTTCTTAG 1434 0.4156 MCIGKLNDQFTVNVTNEEVVSAMLPMQEHWLPLSNLDLILPPVDVGVFFCYNKPMISISTTHNIVGCLKNSLAQSLVSYYAFGGEVVTNSIGEPELLCNNRGVDFVEAVADVDLQSLNLYNPDETIEGKLVPKKKHGVLAVQVTWMRCGGLVVACTFDHRIADAYSTNMFLVSWAEIARPNNKPMSPTTQPCFRRSLLTPRRPSSIHPSLYDMYVPITDLPPPPDPKFKSDIQTDQIISRIYYVTNEQLNNMQSLANSNKTNLDPLQQLHSKLESFSAFLWKMVAEAASIDNKNVIAKIGIVVDGRKRLSNGDKNKEEIMSSYFGNVISIPYGGRSTEELVEKPLNWVADQVHEFLETTMTEEHFLGLIDWVEEHRPIPGLARIYCGSTSGEEGPTFVVSSGQRFPESKIDFGWGKPLFGSYHFPWGGDAGYVMPMPSPKRNGDWLLYMHLPKGYLHFMEFHAPHFFKPMSWDYLLS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01963 477 Pfam Transferase family 11 461 - -
Car02g01963 477 Gene3D - 9 212 IPR023213 -
Car02g01963 477 Gene3D - 225 460 IPR023213 -
Car02g01963 477 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 9 471 - -
Car02g01963 477 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01963 Car-Chr2 50159718 50162117 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01963 12 460 Monolignol Biosynthesis Gene Families AT5G48930 25.217 3.62e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01963 - - cam:101501659 939.488