Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01955 ATGGACATGAATTTCTACCTTACCAAATCCAAGTGGGTATCAACAGTAGCAAGCATATGGATCCAATGCACCAGTGGATCACTCTACACTTTCTCCATCTACTCCCAAACTCTAAAGTCAACGCAACACTACGATCAGTCAACGCTCGACATCGTTTCTGTTTACAAAGACATCGGAGCCAACATCGGTGTCCTGTCAGGTCTCTTATACGATTTCCTTGCCACCAGAACAGCAACTGGGCCGTGGCTTGTTCATTTATTGGGCTCGGCCCAATGCTTCTTGGGCTATTTTCTTATGTGGGCTGCTGTCTCCGGCCTCCTTCCACCGGTGCCTTTGCCGCTCATGTGCTTCTTTATGTTCGTGGCGGCTCATGCTCAGAGTTTCTTTAACACTTCTAATGTTGTCACCGGTGTTCATAATTTCCCTAATTACAGTGGAACCATCGTCGGCATCTTGAAGGGATTTCTAGGTCTAAGTGGAGCAATATTAATTCAAGTGTATCGAACGATATTCATCGACAAACCTATGTCATATCTTTTGATGCTATCACTCTTACCATCTATTAACACTTTGATACTCATGTGGTTTGTAAGAATCCACTACACTCATGAGGTAGAAGAAAAGAAGTATCTCAACATATTTTCTTTGATGGCTCTAGCCATTGCTACATATCTTATGATTGTTATAATCCTAGAGAACATCCTTAGTCTACAATTATCGGTCCGCATATTTACATTCATCGTGCTTATGGTCTTGCTAGCCTCGCTTCTTTATGTTCCATTTAAAGCGCACAAAAGGAGCTCTAGTAGTGCTTTAGAAAGATTTCTTGATGAAGGATCCAACCTAATTGCAGAGCCAAGGTCTCAGGATACAGAGAAGAGGGATTCAAGAGAAGATTCTTTCGATAACCCTTTGTCGGATAATACTAACAACCAAAGGACTTTACAACAAGGAGAAAATCTCAATCTTTTCCAAGCAATGCAAACGTTGAATTTTTGGTTTTTGTTTGTTTCAATGGCATGTGGAATGGGATCAGGACTTGCCACGGTTAACAATATGAGCCAAATAGGAGAATCTCTTGATTATTCCACCATTGAGACAGGCTCCTTGGTTGCCTTATGGAGCATTTGGAACTTTCTCGGCCGGTTCGGAGCTGGTTATGTGTCAGATTATTTTTTACACACAAGAGGATGTGCAAGACCTTTTTTTATGGTGATCACTTTGATGATCATGAGCATTGGTCATGTAGTGATTGCTTATGGACTTCCGGGTGCGCTATATATCGGTTCGATATTGGTCGGTATTTGTTACGGCTCACAGTGGTCTTTAATGCCAACAATCACTTCTGAGGTATTTGGCGTGGGACATATGGGAAGCATATTCAACACCATTTCTATAGCAAGTCCAGTGGGATCTTATATATTCTCTGTAAGAGTACTTGGTTATATATATGATAAAGAAGCATCAGAAGAAGGGTATTATGTGTATAGTTCACTGCCACATACTCCCACAGCCACCAAATTCCAATTCAAAAATCACGCACTCCACCATTCACCACGCGATCGCATTTTCTCTCCTTTAGTAAATTATCCTCACATATACACTTCGATCGGTGAGTGGATAAAAGGTGGAAAGCACAACCAGGCAAATTTGTTTGTGAAGGAATATTTGTTAGCAGACCCTCTGATTCCATATACTTCCATTATTGGTGGAGTTTTTGCTTGCAAAATGGTATATGATCTCACTCAGCTTTTTAGCACCATTCATTTCAAGAGCTATTCCAGCCTCACTAAAATCCAACGTATTGAGTGGAATAACCGTGCTATGTCAACTATCCATGCCATTTTTATAACAACTATGTCATTGTACTTGGTGTTTTGCTCAAATCTATATTCTGATAGCCTGTCGGATGAACTTCTTACAGAACGGAGTTCTGCATTGTCTACGTTTGCTCTGGGGGTTTCTGTTGGTTACTTCATGGCTGACCTGGGGATGATACTTTGGTTTTTTCCTTCTCTTGGTGGATATGAGTATGTGATTCATCATCTGTTTTCTTTAGTAGCAGTAGCCTATTCAATGTTGAGTGGAGAAGGGCAGCTGTACACGTACATGGTCCTCATTTCCGAGACAACAACTCCCGGGATCAATTTGAGATGGTATCTTGATGTAGCTGGAATGAAAAGGTCAAAAGCTTATCTCATCAATGGGGTTGTAATATTCATTGCTTGGCTGGTTGCCAGAATACTTTTGTTTGTATACATGTTTTACCACGCTTACTTGCACATTGATCAGGTAATAACTACTGACACACCGAGTATAAGAATTGTCTTGTGTTTGGTGCTTTGTAGCAATTAG 2355 0.4089 MDMNFYLTKSKWVSTVASIWIQCTSGSLYTFSIYSQTLKSTQHYDQSTLDIVSVYKDIGANIGVLSGLLYDFLATRTATGPWLVHLLGSAQCFLGYFLMWAAVSGLLPPVPLPLMCFFMFVAAHAQSFFNTSNVVTGVHNFPNYSGTIVGILKGFLGLSGAILIQVYRTIFIDKPMSYLLMLSLLPSINTLILMWFVRIHYTHEVEEKKYLNIFSLMALAIATYLMIVIILENILSLQLSVRIFTFIVLMVLLASLLYVPFKAHKRSSSSALERFLDEGSNLIAEPRSQDTEKRDSREDSFDNPLSDNTNNQRTLQQGENLNLFQAMQTLNFWFLFVSMACGMGSGLATVNNMSQIGESLDYSTIETGSLVALWSIWNFLGRFGAGYVSDYFLHTRGCARPFFMVITLMIMSIGHVVIAYGLPGALYIGSILVGICYGSQWSLMPTITSEVFGVGHMGSIFNTISIASPVGSYIFSVRVLGYIYDKEASEEGYYVYSSLPHTPTATKFQFKNHALHHSPRDRIFSPLVNYPHIYTSIGEWIKGGKHNQANLFVKEYLLADPLIPYTSIIGGVFACKMVYDLTQLFSTIHFKSYSSLTKIQRIEWNNRAMSTIHAIFITTMSLYLVFCSNLYSDSLSDELLTERSSALSTFALGVSVGYFMADLGMILWFFPSLGGYEYVIHHLFSLVAVAYSMLSGEGQLYTYMVLISETTTPGINLRWYLDVAGMKRSKAYLINGVVIFIAWLVARILLFVYMFYHAYLHIDQVITTDTPSIRIVLCLVLCSN 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01955 784 Gene3D MFS general substrate transporter like domains 175 499 IPR036259 -
Car02g01955 784 SUPERFAMILY MFS general substrate transporter 214 485 IPR036259 -
Car02g01955 784 MobiDBLite consensus disorder prediction 287 302 - -
Car02g01955 784 Pfam TLC domain 603 782 IPR006634 GO:0016021
Car02g01955 784 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 495 - -
Car02g01955 784 CDD MFS_Mch1p_like 10 485 - -
Car02g01955 784 Pfam Nodulin-like 11 261 IPR010658 -
Car02g01955 784 ProSiteProfiles TLC domain profile. 599 784 IPR006634 GO:0016021
Car02g01955 784 SUPERFAMILY MFS general substrate transporter 9 199 IPR036259 -
Car02g01955 784 MobiDBLite consensus disorder prediction 286 312 - -
Car02g01955 784 SMART lag1_27 599 783 IPR006634 GO:0016021
Car02g01955 784 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 8 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01955 Car-Chr2 49891418 49899604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01955 9 498 Nodulin-like Gene Family AT1G74780 54.672 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01955 - - lja:Lj1g3v0437880.2 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00881 05 47458428 47467096 Car02g01955 02 49891418 49899604 PCT