Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01943 ATGAATTCTCCTACCTTCATCTTTGTACTCTATACCctctttcttttgtgtctcaatactactatttctgtttctgtttctTCATCACCACTTCCAATGTCTTTGAGAAAACAAGCTTCTATCTTAGTTTCTCTGAAACAAGACTTTGAAGCCAAAACTTCTTTGAAAACATGGAACATGTCTAACTACATGTCCCTTTGTTCTTGGAATGGTATTCAATGTGATACAAACAATAGTTCTGTGGTGTCACTAGACATGTCCAACATGAATGTTTCAGGCACTTTTTCATCTTCCATCACAAAACTAAAGAGCCTTAGATTCCTCAACATATCCAACAACATGTTCAATGGAAACATGATGAGTTGGAAATTTTCTATGTTAAAAGATCTTGAAGTTTTTGATGCTTACAACAATGAGTTCAATTGTTCACTCCCTATGGGTGTCACTATGTTACCTAAACTCAAGTACTTGAATTTTGGAGGAAATTTTTTCTATGGAGAAATTCCTTTAATTTATGGAAAAATGTTGAATCTTAACTATTTGTCTCTTGCAGGTAATGATTTGAGAGGTTTCATACCTTATGAGCTTGGTAACCTTACTAATCTTACACATCTTTTTTTAGGATATTACAATGAGTTTGAGGGTGGAATTCCAATTCATTTTGGTAACCTTGTTAATTTAGTTCATCTTGATCTTGCAAATTGTGGTTTGAAAGGTTTCATTCCAAATGAGTTAGGAAAACTTTACAAACTTGACACACTTTTCTTGCAAACCAATCAACTTAGTGGTTCAATTCCATCTCAACTAGGAAACTTGAGTAGCTTGAAATCTCTTGATATGTCAAACAATGAACTAATTGGTAACATACCTAATGAGTTTTCAAACCTTCATGAACTCACACTTTTGAACTTATTCATCAACAAGTTGCATGGTGAAATTCCACCTTTCATTGGTGAGTTACCAAATTTGGAAGTTTTGAAGCTTTGGCATAACAACTTCACAGGTGAAATTCCTTCAAAGCTTGGACAGAATGGTAAATTGAGTGAACTTGATTTGTCAACAAATAAACTCACTGGTTTAGTGCCTAAATCTTTATGCCTTGGAAATAGTCTCAAGATATTGATCTTGCTTAACAATTTTCTGTTTGGTTCTTTGCCTTATGAGCTTGGAAAATGTTACACACTTCAAAGAGTTCGTTTAGGACAAAACTATTTGACAGGAACAATACCAAAAGGTTTTCTTTATTTGCCTCAACTTTCACTTCTTGAACTACAAAACAATTTTCTTCATGGTTTTCTTCCACAACAAACAAGCACTTCACCTTCGAAACTCGGACAGATGAATCTATCGAATAATCGTTTATCCGGGTCGCTACCAAATTCTATTGGAAACTTTCCCAATTTGCAAATTCTGCTTCTTCATGGAAATAGATTCTCAGGTGAAATACCTTCTGATATTGGAAAGTTGAAAACTATTCTAAGGTTGGATATGAGTCTCAACAACTTTTCAGGTAACATTCCTAATGAGATAGGTGAATGTTCTTCACTTACTTATTTAGATTTGAGTCAGAACAAATTATCAGGTCCTATTCCAATTCAAGTTTCTCAAATTCACATACTTAACTATCTTAATGTCTCATTTAACAACTTAAACCAAACACTTCCTAAGGAACTTGGTGCTATTAAAGGCTTAACTTCAGCTGATTTCTCTCATAATGACTTTTCTGGCTCAATTCCTGAAGTTGGTCAATTCTTAGTCTTTAATTCTACATCCTTTGTTGGTAATCCTAAGTTATGTGGATATGGTGAGAATTTGAATAGTCCATGCAACGGTTCTTCATCGGAAATATTCGAGTCTCAGTCGATAAATCGTGCGAAACCTGGAGTTCTTGTGAAGTATAAGCTTATATTTGCATTAGCACTTTTAGTTTGTTCATTGATTTTTGCAAGTTTAGCTATCATgaagagtagaaaaggaagaagaagaagaagaagtagGACATTCTCAAATTCATGGAAGCTAACAACATTTCAAAAGGTGGAATATGGAAGTGAAGATATCTTAGGATGTGTTAAAGAAAGTAACATCATAGGAAGAGGTGGAGCTGGTGTTGTATATGGAGGAACAATGCCAAATGGTGAAAAAGTAGCTGTGAAAAAGTTGTTAGGAATCAACAAAGGTTGTTCTTATGATAATGGTTTATCAGCTGAAATAAAAACACTTGGCAGAATAAGGCATAGGTATATTGTAAGATTGGTTGCATTTTGTTCAAATAGAGAGACTAATTTGCTTGTTTATGAGTACATGAGAAATGGTAGTTTAGGTGAAGTGTTGCATGGGAAAAAGGGTGagtttcttgagtggaatactagagtgaaaatagcaattgaagctgctaaaggactttgctatttgcaccatgattgttcacctttgattattcatagagatgttaagtcaaataacattttgttgaatgatgaatttgaagctcatgttgctgattttggacttgctaagttcttgCAAGATGCTGCTAATGGGACTTCAGAATGTATGTCTTCTATTGTTGGTTCTTATGGCTACATTGCTCCAGAATATGCATACACATTGAAAGTGGATGAGaaaagtgatgtatatagctttggagtggtgttactagaactattaacagggagaaggccagtgggagatTTTGGTGAAGAAGGAATAGACATTGTTCAATGGACAAAATTACAAACTGATTGGAACAAAGAAAAAGTGGTGAAGATTCTTGATGGAAGGTTACATCACATTCCATTAGATGAAGCAATGCAATTATTCTTTGTGGCAATGTTATGTGTTCAAGAACAAAGTGTGGAACGACCAACCATGAGGGAAGTTGTTGAAATGCTAGCACAAGCAAAACAACCAAATACATTTCAAATGTAA 2931 0.3067 MNSPTFIFVLYTLFLLCLNTTISVSVSSSPLPMSLRKQASILVSLKQDFEAKTSLKTWNMSNYMSLCSWNGIQCDTNNSSVVSLDMSNMNVSGTFSSSITKLKSLRFLNISNNMFNGNMMSWKFSMLKDLEVFDAYNNEFNCSLPMGVTMLPKLKYLNFGGNFFYGEIPLIYGKMLNLNYLSLAGNDLRGFIPYELGNLTNLTHLFLGYYNEFEGGIPIHFGNLVNLVHLDLANCGLKGFIPNELGKLYKLDTLFLQTNQLSGSIPSQLGNLSSLKSLDMSNNELIGNIPNEFSNLHELTLLNLFINKLHGEIPPFIGELPNLEVLKLWHNNFTGEIPSKLGQNGKLSELDLSTNKLTGLVPKSLCLGNSLKILILLNNFLFGSLPYELGKCYTLQRVRLGQNYLTGTIPKGFLYLPQLSLLELQNNFLHGFLPQQTSTSPSKLGQMNLSNNRLSGSLPNSIGNFPNLQILLLHGNRFSGEIPSDIGKLKTILRLDMSLNNFSGNIPNEIGECSSLTYLDLSQNKLSGPIPIQVSQIHILNYLNVSFNNLNQTLPKELGAIKGLTSADFSHNDFSGSIPEVGQFLVFNSTSFVGNPKLCGYGENLNSPCNGSSSEIFESQSINRAKPGVLVKYKLIFALALLVCSLIFASLAIMKSRKGRRRRRSRTFSNSWKLTTFQKVEYGSEDILGCVKESNIIGRGGAGVVYGGTMPNGEKVAVKKLLGINKGCSYDNGLSAEIKTLGRIRHRYIVRLVAFCSNRETNLLVYEYMRNGSLGEVLHGKKGEFLEWNTRVKIAIEAAKGLCYLHHDCSPLIIHRDVKSNNILLNDEFEAHVADFGLAKFLQDAANGTSECMSSIVGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEEGIDIVQWTKLQTDWNKEKVVKILDGRLHHIPLDEAMQLFFVAMLCVQEQSVERPTMREVVEMLAQAKQPNTFQM 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01943 976 SUPERFAMILY L domain-like 287 596 - -
Car02g01943 976 ProSiteProfiles Protein kinase domain profile. 691 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01943 976 Gene3D Ribonuclease Inhibitor 369 492 IPR032675 -
Car02g01943 976 Pfam Protein kinase domain 693 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01943 976 Gene3D Phosphorylase Kinase; domain 1 659 768 - -
Car02g01943 976 SUPERFAMILY Protein kinase-like (PK-like) 684 965 IPR011009 -
Car02g01943 976 Gene3D Ribonuclease Inhibitor 191 290 IPR032675 -
Car02g01943 976 PANTHER UNNAMED PRODUCT 90 973 - -
Car02g01943 976 PANTHER UNNAMED PRODUCT 8 105 - -
Car02g01943 976 Gene3D Transferase(Phosphotransferase) domain 1 769 975 - -
Car02g01943 976 SMART LRR_typ_2 416 440 IPR003591 -
Car02g01943 976 SMART LRR_typ_2 320 344 IPR003591 -
Car02g01943 976 SMART LRR_typ_2 345 367 IPR003591 -
Car02g01943 976 SMART LRR_typ_2 272 295 IPR003591 -
Car02g01943 976 SMART LRR_typ_2 465 489 IPR003591 -
Car02g01943 976 SMART LRR_typ_2 224 248 IPR003591 -
Car02g01943 976 Gene3D Ribonuclease Inhibitor 35 190 IPR032675 -
Car02g01943 976 SMART serkin_6 691 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01943 976 SUPERFAMILY L domain-like 63 359 - -
Car02g01943 976 Pfam Leucine Rich Repeat 226 248 IPR001611 GO:0005515
Car02g01943 976 Pfam Leucine Rich Repeat 274 296 IPR001611 GO:0005515
Car02g01943 976 Gene3D Ribonuclease Inhibitor 494 601 IPR032675 -
Car02g01943 976 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 90 973 - -
Car02g01943 976 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 8 105 - -
Car02g01943 976 PRINTS Leucine-rich repeat signature 347 360 - -
Car02g01943 976 PRINTS Leucine-rich repeat signature 513 526 - -
Car02g01943 976 Gene3D Ribonuclease Inhibitor 291 368 IPR032675 -
Car02g01943 976 Pfam Leucine rich repeat N-terminal domain 37 75 IPR013210 -
Car02g01943 976 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01943 Car-Chr2 49796658 49800905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01943 22 967 Receptor kinase-like Gene Family AT5G65700 55.761 0.0 1036
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car02g01943 Pkinase 8.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01943 - - gmx:100816158 1483.77