Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01932 ATGGGTATGTTTGTCGTAGCACCTTCTTTCCACCACCACCATGAATCTCTTCTCTCCGATCCTCATTCTCTTAACCCCGCCACCGCTCTCGGCGTCGGAGTTATCCCTTTACTCACTACTTCACCTTGTCATCTCGATAACGAATCCAACATGTTGAATAACAGAAGACAACAACAAGGAATTCAGTTTTGGCATGaacaacatcatcaacaacaacaacaacaaGGTTCACATCATCACTATTTGAAAAAACAAAGTTTTCTTGATCATAATACAAGTCCAACGAATTTAATCCACGGTGGTGGTGGTTTAACTGGTTCAGGTACAAGTAGTGGTGGAGGAACAACAACGTGTCAAGATTGTGGAAACCAAGCGAAGAAAGATTGTACTAATAGAAGATGTAGAACTTGTTGTAAAAGTAGAGGTTTTGATTGCCCTACTCATGTCAAGAGTACTTGGGTACCTGCTGCTAGAAGAAGAGAACGTCTTGCCACGGCGGCCACCACCACGGTGGTTGCTGGTGGTTCTAGTGGTTCAACTTCCGGTGCTAAGAAACCTAGACTTATTGCTTCACAACAAactacaactacttctcatacttctacttctaatactacacctcctaGAAGCTTTGACACTGGTTCTAGTCATCAAGATGCAAGTTTCAAAGAGTCAATGCCTGGTCAAGTACGTGCACCAGCAGTATTCAAGTGTGTTAGAGTGACATCAGTAGATGATGGAAAAGATGAATATGCATATCAAGCTGTAGTGAAGATTGGTGGACATGTTTTCAAAGGCTTTCTTTATGATCATGGTGTTGAGAATAATAACAATAACAAAGAAGTTTATCCTAACCTTTCTGAGCTTCATTTAGGTGGAGGTAATAGAAATGGTGTTTCTTCTTCATCACCGATGATGGATCCTTCACACGATGTTTATGCAGCTGCTTCAAgtgctggtggtggtggtggtggtTTACTAGGAGGTCATGGTTCAGCTTATGGTAATCAAATAAATTGA 1020 0.3745 MGMFVVAPSFHHHHESLLSDPHSLNPATALGVGVIPLLTTSPCHLDNESNMLNNRRQQQGIQFWHEQHHQQQQQQGSHHHYLKKQSFLDHNTSPTNLIHGGGGLTGSGTSSGGGTTTCQDCGNQAKKDCTNRRCRTCCKSRGFDCPTHVKSTWVPAARRRERLATAATTTVVAGGSSGSTSGAKKPRLIASQQTTTTSHTSTSNTTPPRSFDTGSSHQDASFKESMPGQVRAPAVFKCVRVTSVDDGKDEYAYQAVVKIGGHVFKGFLYDHGVENNNNNKEVYPNLSELHLGGGNRNGVSSSSPMMDPSHDVYAAASSAGGGGGGLLGGHGSAYGNQIN 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01932 339 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 339 IPR007818 GO:0003700|GO:0006355
Car02g01932 339 Pfam Domain of unknown function (DUF702) 115 274 - -
Car02g01932 339 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 339 - -
Car02g01932 339 MobiDBLite consensus disorder prediction 90 115 - -
Car02g01932 339 MobiDBLite consensus disorder prediction 169 223 - -
Car02g01932 339 MobiDBLite consensus disorder prediction 167 226 - -
Car02g01932 339 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 226 273 IPR006511 -
Car02g01932 339 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 117 159 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01932 Car-Chr2 49656731 49659305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01932 3 313 C2H2 Transcription Factor Family AT5G12330 52.025 2.52e-85 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Car02g01932 DUF702 5e-61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01932 - - gmx:100776306 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01932 02 49656731 49659305 Car02g01932 02 49656731 49659305 ECH