Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01930 ATGAGCTTCAGCACAGTCTCAGGTAGTTCTTCCATGATGGTGGGAGCTAAGAGAGATTATATAGTCTCTCGCGACGACTACAACAACGACTACGACAAATCCGTGATGCAAACACCAACACAACCATCCTCAAGCAAATATATTGAGGCAAATGAGAACATGAACACATCAAGCTCCAAGAAAATGAGAGGAAGACCCATAGGATCAAAGAATAAGCCAAAAGTATCAACAATTATTAAGGAAAACAATGGAAGCATGATGGAAGCAATTGTGATTGAAATATCAGCTGGAAAAGATATTGTGGAAACACTCATAAACTTGGCTCATACACGTCAAGCTAACTTAACAATATTGAGTGGTTTTGGTCTTGTTTCTGATGTTACACTTTTGAATCCTGTTTCTCGTTCCCCTTCTTTCCTTAAAGGTCCAATATTCCAAATGATGTCTCTCTCTGGCACTTACATCAATGCTAATTGTGCTTATGTTCCTCCTCGTTTCATCACTCAACCAAGATGTTCCTCTTTTTCCATTTACCTATCTGCTGGTCGTGGACAAGTCTTTGGTGGCATTGTTGGTGGTGAGATTAAGGCTGTTGGTGTTGTTAGGATTACTGCAACTCTTTTTGTAAATTCTGAGTTTCATAGAATGGCCATCATCAATCAAATTTTTCATGAATTTGAAGAAGatgctagtgctagtggtaatggtaatggtaatggtggtggtGTCATCACAAATGTTGTGACTCCATTCAACAATAACAACACTTCCATTCATGCTTTGGGATTTGGTCTTATGTCTGCCAATCAACAGATTATTCCAACTCCTCCTCCTCCTGTTCCTACTGATGTCAATGTCATATGGTGGAACCATTCCCCTCGTTTTAATCAATCTTAA 897 0.3724 MSFSTVSGSSSMMVGAKRDYIVSRDDYNNDYDKSVMQTPTQPSSSKYIEANENMNTSSSKKMRGRPIGSKNKPKVSTIIKENNGSMMEAIVIEISAGKDIVETLINLAHTRQANLTILSGFGLVSDVTLLNPVSRSPSFLKGPIFQMMSLSGTYINANCAYVPPRFITQPRCSSFSIYLSAGRGQVFGGIVGGEIKAVGVVRITATLFVNSEFHRMAIINQIFHEFEEDASASGNGNGNGGGVITNVVTPFNNNNTSIHALGFGLMSANQQIIPTPPPPVPTDVNVIWWNHSPRFNQS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01930 298 Pfam Plants and Prokaryotes Conserved (PCC) domain 89 209 IPR005175 -
Car02g01930 298 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 292 - -
Car02g01930 298 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 29 292 IPR014476 GO:0003680
Car02g01930 298 MobiDBLite consensus disorder prediction 53 73 - -
Car02g01930 298 Gene3D - 88 227 - -
Car02g01930 298 ProSiteProfiles PPC domain profile profile. 84 229 IPR005175 -
Car02g01930 298 CDD DUF296 90 209 IPR005175 -
Car02g01930 298 SUPERFAMILY AF0104/ALDC/Ptd012-like 85 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01930 Car-Chr2 49608696 49609592 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01930 60 240 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 31.551 5.83e-23 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01930 - - cam:101498344 540.806