Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01929 ATGACACAGAACGAAGAAACACCATCGTCTTACTCTCCAAATTCTAAGAATGAATCCTTAGAGAATAAAGCTTTGGAATTCTCCGCACCGAGTCTTGCCAACAACAATGAAAACTTGACGATGGAAACACCACCATCGTCAAGACCATCCTCCTCCTCGGTCAAAAGACCCAGGGGGAGACCCAGAGGATCAAAAAATAAGCCGAAACCACCTGTTGTGATCAATATAGATCCATCAGAGACAAGTATGAAACCAATTTTGATTGAAATTCCAGCTGGAAATGATGTTGTGGAATCCCTGATCAACATGGCTTGGCGTCATCAAGCAGATATATCAGTGTTAAGAGGTTTTGGTATGGTCTCAAACATTACTCTTTGCAATCCAATATCTCATTCCCCTGCATTCACTTATCAAGGGCCATTCCAAATGATATCTCTATGTGGAACATACGTTAATCCCAATTGTGGTCGTGTTCCATCACAATTCATAACTCACCCTGCTTGTTCCTCTTTTACAATTTACCTATCTGGTGGTCGAGGTGGACAAGTGTTTGGTGGTGTTGTTGGAGGAAAAGTTATGGCTGCTGAGGTTGTTTCAATCACTGCCACTCTTTTCAAAAAGCCAAAGTTTTATAGGGTAGTTACCACCAATGGAGGTATTAAGGAAGTTGCTGAAGATGAAACCAGACATGTTGATAACAACAACAATGTCATTATGTCTGGTTATAGTGCCAATTCAAGCCACATGAATCCTCCTTCTGATGTCAATTTCATGCACTGGAATCACTCTACCCGTACTAATAATTACTAG 810 0.4099 MTQNEETPSSYSPNSKNESLENKALEFSAPSLANNNENLTMETPPSSRPSSSSVKRPRGRPRGSKNKPKPPVVINIDPSETSMKPILIEIPAGNDVVESLINMAWRHQADISVLRGFGMVSNITLCNPISHSPAFTYQGPFQMISLCGTYVNPNCGRVPSQFITHPACSSFTIYLSGGRGGQVFGGVVGGKVMAAEVVSITATLFKKPKFYRVVTTNGGIKEVAEDETRHVDNNNNVIMSGYSANSSHMNPPSDVNFMHWNHSTRTNNY 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01929 269 CDD DUF296 84 157 IPR005175 -
Car02g01929 269 MobiDBLite consensus disorder prediction 1 78 - -
Car02g01929 269 ProSiteProfiles PPC domain profile profile. 80 226 IPR005175 -
Car02g01929 269 Gene3D - 83 234 - -
Car02g01929 269 MobiDBLite consensus disorder prediction 1 54 - -
Car02g01929 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 264 - -
Car02g01929 269 SUPERFAMILY AF0104/ALDC/Ptd012-like 81 222 - -
Car02g01929 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 15 264 IPR014476 GO:0003680
Car02g01929 269 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 206 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01929 Car-Chr2 49602565 49603374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01929 47 227 AT-hook Motif Nuclear Localized (AHL) Family AT1G14490 39.344 1.10e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01929 - - cam:101498013 488.034