Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01897 ATGGAACAAAAAACAACCTCTTCTTCATGCCTtctattctcaattctttcttttcttttcatctttctttcatgtttctCAGGATCTGTTGCTGCTTACAAAAATTACACAGTAGGAGATTCTTTAGGCTGGTTTGACACTCTTGAAAAGCCTAATGTTAATTACCAGAAATGGGTTGCCAAAAAAGAATTCAGCTTGGGAGATTTCCTCATTTTCAACACAGACAACAACCACTCTATTATTCAAACATACAATTCCACCACATACAAATCATGTGATTATAATGATGCACAAGACAAGGACACATTCCAGTGGTCATCACTTGATCCATCCAACGCTGAGACACATACCGTGGCAGTTCCTTTACTAAAGGAAGGTTTAACATATTTCTTCTCAAGTGATTATGATGGTGAGCAATGCAAAAATGGACAACGTTTCAAAATAAATGTGACTCATGGGGAAGGGTTGCCCAAGAGTCTTCAAAATCCAGACGATTCTCCATCTCCTGTTAGTCCAGTGTCCGGTGACGATGATTCGGCACCAGACACAATCGTTCCTTCCAATTTCAACAATCCTAAAGAAGATAGTGATGATGAAAAATCTAGTGATAAAGACAAAGACACATCTAATTCTATTTCGTTGATAAAGTATACACAACTTCACAACATGTTGTACGGGTCTCTTGTCTTGTTAGGGATGTTTTTCTTGCTTTAG 714 0.3599 MEQKTTSSSCLLFSILSFLFIFLSCFSGSVAAYKNYTVGDSLGWFDTLEKPNVNYQKWVAKKEFSLGDFLIFNTDNNHSIIQTYNSTTYKSCDYNDAQDKDTFQWSSLDPSNAETHTVAVPLLKEGLTYFFSSDYDGEQCKNGQRFKINVTHGEGLPKSLQNPDDSPSPVSPVSGDDDSAPDTIVPSNFNNPKEDSDDEKSSDKDKDTSNSISLIKYTQLHNMLYGSLVLLGMFFLL 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01897 237 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Car02g01897 237 PANTHER BNAA08G26900D PROTEIN 6 218 - -
Car02g01897 237 MobiDBLite consensus disorder prediction 153 208 - -
Car02g01897 237 Pfam Plastocyanin-like domain 44 144 IPR003245 GO:0009055
Car02g01897 237 SUPERFAMILY Cupredoxins 34 151 IPR008972 -
Car02g01897 237 MobiDBLite consensus disorder prediction 192 208 - -
Car02g01897 237 CDD Phytocyanin 34 150 - -
Car02g01897 237 PANTHER BLUE COPPER PROTEIN 6 218 IPR039391 GO:0009055
Car02g01897 237 Gene3D - 32 153 IPR008972 -
Car02g01897 237 ProSiteProfiles Phytocyanin domain profile. 34 152 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01897 Car-Chr2 49225846 49228094 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01897 18 200 Phytocyanin Superfamily AT1G08500 57.368 1.38e-70 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01897 - - gmx:100499721 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01897 02 49225846 49228094 Car02g01897 02 49225846 49228094 ECH