Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01895 ATGGCTTCAAGAGTTATTGCTCCAATCGAACTTCAACAACCCAGAGGTGAGaataataataataataataaGCAAAAGAATGCACTGGGGGTAGAAGGAAGAAACAGAAGGGGGGTGCTTAAGGATATTGGTAATCTTGTGGCTAATCAAGCAGATCTTGGTGTTAATGCTAATGTGTGCAAGCCTAACACAAGGTCTCAGGCTATTGCTCAAGTCCTAGCAGAGAAAAACAAGAAATCAAGCACTAATTTGGACTTACCTCAAAAGCCTAAAGAACCTGAAGTTATCATCATAAGCTCTGATGAAGAATCTGAGGGAGTGAAGGAGAAACAACAAGCTGTTAGAGGAAGAAAGCAAAGAGAAAGGTCCACTACAAAAAATGGCAAGGCCTTTAGTTCAGTACTTTCAGCTAGAAGCACGGTTGCTTGTAGTATTGTACCAAAGGAATTGGTAATCAACATTGATGCTACTGATAAGGACAATGAATTGGCTGCAACTGAGTACATTGATGACATCTACAAGTTTTACAAACTCACTGAAGAAGATGGTCGTGTCCATGATTATATGGTTTCACAGCCGGATATAaatgccaaaatgagatcaatccttgtggactggttgatagaagtgcaccgaaaattcgaactcATGCCAGAAACTTTCTATCTGACTCTTAACATTGTTGACAGATTCTTGTCAACAAAGGTTGTACCTAGAAATGAACTTCAGCTTGTTGGAATAAGCTCAATGCTTATAGCATCCAAATATGAAGAGATATGGGCACCAGAGGTTAATGACTTTGTAATCATATCAGACAGTGCCTATGTTAGAGAACAGGTTCTGATTATGGAGAAAACAATCTTGAGAAATTTGGAATGGTATCTAACTGTTCCTACTCCTTATGTGTTCTTGGTTCGGTACATCAAAGCCTCAACTCCCTCTGATAAAGAGATGGAAAATATGGTGTATTTCCTAGCTGAACTTTCTATGATGCATTATGCTACTGTATCATTGTATAGTCCTTCAATGATTGCTGCTTCTGCTGTTTATGCCGCAAGATCTACCCTTGAGAAGAGCCCTTTTTGGACTGATACTTTGAAGCACTACACAGGCTTCTCCGAGGAACAACTAAGGGAATGTGCCAAACTCATGGTGAGCTTTCATTCTGCTGCTCCAGAAAGCAGGCTGAAGGCAATTTACAAGAAATTCTGTAGCACAGATCGTTGTGCTGTAGCTCTTCGTACTCCAGCCAAAAACTTGTCAGCACACACAGACACAGAGTCTTGA 1287 0.3807 MASRVIAPIELQQPRGENNNNNNKQKNALGVEGRNRRGVLKDIGNLVANQADLGVNANVCKPNTRSQAIAQVLAEKNKKSSTNLDLPQKPKEPEVIIISSDEESEGVKEKQQAVRGRKQRERSTTKNGKAFSSVLSARSTVACSIVPKELVINIDATDKDNELAATEYIDDIYKFYKLTEEDGRVHDYMVSQPDINAKMRSILVDWLIEVHRKFELMPETFYLTLNIVDRFLSTKVVPRNELQLVGISSMLIASKYEEIWAPEVNDFVIISDSAYVREQVLIMEKTILRNLEWYLTVPTPYVFLVRYIKASTPSDKEMENMVYFLAELSMMHYATVSLYSPSMIAASAVYAARSTLEKSPFWTDTLKHYTGFSEEQLRECAKLMVSFHSAAPESRLKAIYKKFCSTDRCAVALRTPAKNLSAHTDTES 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01895 428 MobiDBLite consensus disorder prediction 98 125 - -
Car02g01895 428 CDD CYCLIN 296 385 IPR013763 -
Car02g01895 428 Gene3D - 171 412 - -
Car02g01895 428 PANTHER CYCLINS 31 419 IPR039361 -
Car02g01895 428 SUPERFAMILY Cyclin-like 297 418 IPR036915 -
Car02g01895 428 CDD CYCLIN 199 288 IPR013763 -
Car02g01895 428 SMART Cyclin_C_2 298 417 IPR004367 -
Car02g01895 428 MobiDBLite consensus disorder prediction 1 33 - -
Car02g01895 428 MobiDBLite consensus disorder prediction 98 129 - -
Car02g01895 428 Gene3D - 185 296 - -
Car02g01895 428 SUPERFAMILY Cyclin-like 160 295 IPR036915 -
Car02g01895 428 Pfam Cyclin, N-terminal domain 171 295 IPR006671 -
Car02g01895 428 Pfam Cyclin, C-terminal domain 298 413 IPR004367 -
Car02g01895 428 PIRSF Cyclin_A_B_D_E 1 428 IPR039361 -
Car02g01895 428 MobiDBLite consensus disorder prediction 13 29 - -
Car02g01895 428 ProSitePatterns Cyclins signature. 200 231 IPR006671 -
Car02g01895 428 PANTHER CYCLIN-B1-4 31 419 - -
Car02g01895 428 SMART cyclin_7 205 289 IPR013763 -
Car02g01895 428 SMART cyclin_7 302 386 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01895 Car-Chr2 49201279 49204350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01895 24 413 Core Cell Cycle Gene Families AT2G26760 53.333 1.47e-140 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01895 K21777 - gmx:547782 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01895 02 49201279 49204350 Car02g01895 02 49201279 49204350 ECH