Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01886 ATGGCTGTTACCTTTTCAGATCTACACACACAAGAGGGTCTCAAATCCCTCGATGATTTCCTCTCTGGAAAGACCTATATTTCTGGGGATCAATTGACAAAGGATGATGTCAAAGTGTATGGAGCTGTTACTGAAAAGCCAAGTGACTCTTTTCCCAATGCTGCTAGTTGGTACGATGTTGTCTCTTCACATCTTGCTGCAAGTTTCCCTGGGAATGCTCAAGGTGTGAAATTCACAGGAAGTGCTGCTCCAGCTGCAGCAGCAGCACCTGCCAAAGCAGATGCACCtgctgatgaagatgatgatgatCTCGATCTCTTTGGTGATGAAACAGAGGAGGAGAAGAAGGCAGCAGAGGAAAGAGAGGCTTCTAAAAAGCCTGCCAAGAAGAAAGAAAGTGGCAAGTCTTCCATTCTGCTCGATGTTAAGCCTTGGGATGACGAGACAGACATGAAGAAGTTAGAAGAAGCTGTTCGTAGCGTTGAGTTGCCTGGTTTAACCTGGGGAGCATCCAAGCTGGTTGCTGTTGGATATGGAATCAAGAAGCTGCAGATCATGTTGACCATCATTGATGATCTTGTGTCCGTGGATGACCTTATTGAAGAAACACTCACGGTTGAGCCAATTAATGAGTTTGTCCAGAGCTGTGACATTGTGGCCTTCAACAAAATTTAA 675 0.44 MAVTFSDLHTQEGLKSLDDFLSGKTYISGDQLTKDDVKVYGAVTEKPSDSFPNAASWYDVVSSHLAASFPGNAQGVKFTGSAAPAAAAAPAKADAPADEDDDDLDLFGDETEEEKKAAEEREASKKPAKKKESGKSSILLDVKPWDDETDMKKLEEAVRSVELPGLTWGASKLVAVGYGIKKLQIMLTIIDDLVSVDDLIEETLTVEPINEFVQSCDIVAFNKI 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01886 224 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 100 108 IPR001326 GO:0003746|GO:0005853|GO:0006414
Car02g01886 224 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 213 224 IPR001326 GO:0003746|GO:0005853|GO:0006414
Car02g01886 224 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 1 224 - -
Car02g01886 224 Gene3D - 128 224 IPR014717 -
Car02g01886 224 SUPERFAMILY eEF-1beta-like 132 224 IPR036219 -
Car02g01886 224 CDD EF1B 133 224 IPR014038 GO:0003746|GO:0006414
Car02g01886 224 SUPERFAMILY GST C-terminal domain-like 9 66 IPR036282 -
Car02g01886 224 SMART EF1_GNE_2 135 224 IPR014038 GO:0003746|GO:0006414
Car02g01886 224 MobiDBLite consensus disorder prediction 112 132 - -
Car02g01886 224 Pfam EF-1 guanine nucleotide exchange domain 137 224 IPR014038 GO:0003746|GO:0006414
Car02g01886 224 PANTHER ELONGATION FACTOR 1-BETA 2 1 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01886 Car-Chr2 49136476 49138719 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01886 1 224 Eukaryotic Initiation Factors Gene Family AT5G12110 71.491 4.57e-105 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01886 K03232 - gmx:100306132 314.309