Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01865 ATGGATTCGTTTGACACTAATGGAAATGGAAACAACGGAGAATCTTTGCCTCCACCACCACCCATTGTCCCACCTGACGTTGAACCTGTGAAAATAGAACAAGTTAAGAAGAAGGGTCCCACTAGGGTTCCTATGGCTAGGCGTGGTTTAGGTTCAAAGGGAACAAAACTGCCTCTGCTTACTAATCACTTTAAAGTTAATGTTGCCAACAACGATGGGTATTTCTACCAGTACAGTGTGGCTCTTTTTTATGAAGATGGGCGTCCTGTTGAAGGGAAGGGTGCTGGGAGAAAGTTACTGGACAGAGTTCAAGAAACTTATGACTCTGAGTTGAAtgggaaagaccttgcttatgatggtgagaagaccctgttcaccataggctcattagctcagaacaaactagagttcacagttgttctggaagatgtgacatccaacagGAACAACGGAAATGCCAGCCCTGACGGGCATGGCAGTCCGAACGACGCTGACAAGAAGAGGATGCGACGAGCCTATCGCTCCAAGACATTTAAAGTTGAAATAAGCTTTGCTTCTAAAATCCCCCTTCAGGCTATTGCCAATGCCTTGAAGGGGCATGAAACTGAGAACTACCAAGAAGCGATAAGGGTTCTTGACATCATATTGAGGCAGCATGCTGCCAAGCAAGGTTGTCTGCTTGTTCGCCAAAATTTCTTCCACAATGATCCAAAGAATTTCACTGACGTAGGAGGTGGTGTTCTTGGATGCAGAGGGCTGCACTCCAGCTTTAGAACTACACAAAGTGGACTGTCCCTCAATATAGATGTATCCACTACCATGATTGTCCGTCCTGGGCCTGTTGTTGACTTCTTAATTGCTAATCAAAATGTGAGGGATCCTTTCAGTCTTGACTGGGCTAAGgccaaaaggacccttaaaaatttgaggatcaaaactagcccaaccaaccaagagtacaagatcacgggattaaGTGAACAACCTTGCAAAGACCAGCTGTTTACAATGAAGAAAAGAGGGGGTGACAATGATGAGACAGAGGAGATAACAGTTTATGACTATTTTGTTAACCGTCGCAAGATTGATCTGCAATACTCTGCCGAACTTCCATGCATAAATGTGGGAAAGCCAAAAAGGCCAACTTACGTGCCCATTGAGCTTTGCTCTTTGGTATCCTTGCAAAGGTACACCAAAGCTCTTTCAACACTGCAAAGGTCTTCGCTTGTAGAGAAGTCAAGGCAGAAGCCTCAGGAAAGAATGCGGGTTTTAAACGATGCATTGAAAACCAGCAACTACGGAGCTGAACCCATGCTGCGAAACTGCGGTATTTCAATAACTTCTGGCTTTACCCAAGTTGATGGACGGGTTTTGCAGCCACCAAAGTTGATGTTTGGAAACGGAGAACATTTCAATCCAAGGAATGGCAGATGGAACTTCaacaacaagAAAATCGTGCAACCTACTAAAATAGACAAATGGGCTGTGGTAAACTTTTCTGCTCGTTGTGATGTACGAGGTCTAGTGAGGGATCTGATCAAATGTGGAGGAATGAAAGGAATTTTGATAGAGCAACCTTTTGATGTATTTGAAGAAAATAGTCAGTTTAGGCGTGCGCCACCTGTAGTAAGAGTTGAAAAAATGTTTGAGTTTGTTCAGTCCAAGCTTCCTGGGGCTCCCCAGTTTCTCCTCTGTCTGCTTCCTGAGAGGAAGAACTCTGATCTATATGGTCCATGGAAGAAAAAGAATCTGGCTGAGTTTGGAATTGTTACTCAGTGCATAGCTCCTACCAAGGTTAATGATCAGTATCTGACCAATGTTTTACTGAAGATCAATGCAAAGCTTGGGGGTATGAACTCTCTATTGGGTGTTGAACATTCTCCATCCATCCCTATTGTTTCTAAAGCTCCCACCCTTATCTTGGGCATGGATGTCTCTCATGGTTCACCTGGGCAAACTGAGATTCCTTCAATTGCCGCGGTCGTAAGCTCGAGACAATGGCCCCTTATATCTAAATATAGGGCATGCGTCCGAACACAGGGGGCGAAGGTAGAAATGATTGACAATTTGTTTAAGCCTGTGTCTGATAAGGAGGATGAAGGAATTATAAGGGAGCTTTTGATTGATTTCTATACTAGTTCTGGGAACAGAAAACCAGACAATATAATCATTTTTAGGGATGGTGTTAGTGAGTCCCAGTTCAATCAAGTTCTGAACATTGAACTCggccaaatcattgaggcttgtaagtttcttgatgaaagctggaaccccaagtttacggtgatTGTTGCACAGAAAAATCATCACACCAAATTCTTCCAGCCTGGGTCTCCTGACAATGTGCCTCCTGGAACTGTTGTGGACAATAAAATTTGTCATCCTCGGAACTACGATTTCTATATGTGTGCTCATGCAGGAATGATTGGTACTAGCAGGCCTACGCATTATCACGTTCTTTTGGATGAAATTGGTTTTTCTCCAGATGATCTTCAGGAGCTCGTCCATTCTCTGTCCTATGTTTATCAGCGGAGCACCACTGCCATTTCTGTGGTTGCCCCAATATGCTATGCTCATTTGGCTGCATCCCAAGTGGGACAATTCATGAAGTTTGAAGATAAATCAGAAACATCTTCTAGTCAAGGTGGTCTGAACGCCTCTCCTGTTCCTCAGTTGCCTAAGTTACAGGAAAAAGTCTGCAATTCCATGTTTTTTGTATAA 2721 0.3965 MDSFDTNGNGNNGESLPPPPPIVPPDVEPVKIEQVKKKGPTRVPMARRGLGSKGTKLPLLTNHFKVNVANNDGYFYQYSVALFYEDGRPVEGKGAGRKLLDRVQETYDSELNGKDLAYDGEKTLFTIGSLAQNKLEFTVVLEDVTSNRNNGNASPDGHGSPNDADKKRMRRAYRSKTFKVEISFASKIPLQAIANALKGHETENYQEAIRVLDIILRQHAAKQGCLLVRQNFFHNDPKNFTDVGGGVLGCRGLHSSFRTTQSGLSLNIDVSTTMIVRPGPVVDFLIANQNVRDPFSLDWAKAKRTLKNLRIKTSPTNQEYKITGLSEQPCKDQLFTMKKRGGDNDETEEITVYDYFVNRRKIDLQYSAELPCINVGKPKRPTYVPIELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQERMRVLNDALKTSNYGAEPMLRNCGISITSGFTQVDGRVLQPPKLMFGNGEHFNPRNGRWNFNNKKIVQPTKIDKWAVVNFSARCDVRGLVRDLIKCGGMKGILIEQPFDVFEENSQFRRAPPVVRVEKMFEFVQSKLPGAPQFLLCLLPERKNSDLYGPWKKKNLAEFGIVTQCIAPTKVNDQYLTNVLLKINAKLGGMNSLLGVEHSPSIPIVSKAPTLILGMDVSHGSPGQTEIPSIAAVVSSRQWPLISKYRACVRTQGAKVEMIDNLFKPVSDKEDEGIIRELLIDFYTSSGNRKPDNIIIFRDGVSESQFNQVLNIELGQIIEACKFLDESWNPKFTVIVAQKNHHTKFFQPGSPDNVPPGTVVDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGQFMKFEDKSETSSSQGGLNASPVPQLPKLQEKVCNSMFFV 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01865 906 MobiDBLite consensus disorder prediction 146 168 - -
Car02g01865 906 Pfam Piwi domain 563 870 IPR003165 GO:0003676
Car02g01865 906 SMART DUF1785_2 226 278 IPR014811 -
Car02g01865 906 Pfam Argonaute linker 1 domain 228 276 IPR014811 -
Car02g01865 906 SUPERFAMILY PAZ domain 273 433 IPR036085 GO:0005515
Car02g01865 906 CDD Piwi_ago-like 437 862 IPR045246 -
Car02g01865 906 Pfam PAZ domain 282 409 IPR003100 GO:0005515
Car02g01865 906 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 2 905 - -
Car02g01865 906 SMART Piwi_a_2 562 870 IPR003165 GO:0003676
Car02g01865 906 Gene3D paz domain 272 397 - -
Car02g01865 906 SUPERFAMILY Ribonuclease H-like 546 868 IPR012337 -
Car02g01865 906 Pfam Argonaute linker 2 domain 419 465 IPR032472 -
Car02g01865 906 Gene3D - 629 906 IPR036397 GO:0003676
Car02g01865 906 ProSiteProfiles Piwi domain profile. 562 870 IPR003165 GO:0003676
Car02g01865 906 CDD PAZ_argonaute_like 278 392 - -
Car02g01865 906 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 2 905 - -
Car02g01865 906 MobiDBLite consensus disorder prediction 1 27 - -
Car02g01865 906 Pfam N-terminal domain of argonaute 56 216 IPR032474 -
Car02g01865 906 Gene3D - 457 623 - -
Car02g01865 906 Pfam Mid domain of argonaute 472 507 IPR032473 -
Car02g01865 906 ProSiteProfiles PAZ domain profile. 303 393 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01865 Car-Chr2 48952334 48959547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01865 47 905 Eukaryotic Initiation Factors Gene Family AT5G43810 34.624 4.35e-156 482