Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01861 ATGCAGGCTATGTGGTTGATGCTGTTGTTGTTGGTGGATATTGCATTAGGGAATTCAGATACTGATGCACTTCTTGAACTCAAGAAGGGTATTCAGAATGACCCTTATGGATTAGTTCTTAAGTCTTGGGATTCCAAGTCATTAGAATCTAATGGTTGTCCTCAGAATTGGTATGGAATATTATGCAGTGAAGGAAATGTTATATCCATCACTCTTGACAATGCTGGTTTGGTTGGAGAGTTTAATTTCGTTGCAATTAGTGGCCTTACTATGCTTCACAACTTGTCAATTGTAAACAACCAATTCACAGGAAGTATGTTACATATTAGTCCAATGAAATCGCTTAAATTTCTCGATTTGTCTCTCAACAAGTTTAACGGGTCGTTTCCATCTACTTTTGTCGAATCGCGTAACTTAGTGTATCTGAATCTTTCTTCAAATGAATTTAGTAGCACTATTCCGCCCGTGTTTCGCAAACTTGAGCAGTTGAAGTATTTAGATTTTCACAGTAATAGCTTTTCTGGTGATATTATGAACATCTTTTATCAGATGGGAAGTGTTTTACATGTTGACTTAAGCAGCAACAAGTTCTCTGGTACATTGGATTTGGGACTTGGAGATGTCTCTTTTCTCTTCTCGATTCGATATTTAAATGTTAGCTACAATTCTTTGACTGGTGAACTATTTGCTCATGATGGTATGCCATACCTTGACAATTTAGAGGTGTTTGATGCTAGTAATAATCAGCTAGTTGGTAATATACCTTCCTTTGCGTTTGTCGTATCGCTAAGGATTCTTCGACTATCATGCAATCATTTGACAGGTTCATTTCCAGAAACTTTGTTGAAGGAAAGTTCTATGATGTTGTCTGAACTTGATCTTAGTCAAAACAAGCTTGAAGGTCCTATTGGAAGCATCACCTCGATGACTCTAAGGAAGCTTAATATATCTTCAAACAAATTTTCAGGACCATTACCTCTCAAGTTAGGCCATTGTGCCATCATTGATTTGAGCAATAACATGCTGTCAGGAAATTTGTCAAGGATCAAATATTGGGGTAACTATGTGGAACTTATTCAGTTAAGTTCAAACTCATTGTCTGGAACGCTTCCGAACGAAACTTCGCAATTTTTAAGGTTAACTTCACTTAATGTATCCAATAACTCATTGGAGGGATTTCTTCCGCCGGTGTTGGGAACCTATCTGGAGCTAAAAGTTATCGATCTTAGTCTCAACCAGCTTTCTGGATTCCTTTTACCAGCCCTTTTTGCCTCAACCAAATTGACTACTCTTAATCTCTCAAACAATAAGTTTTCTGGACCGATTCCTTTTCAACTTCCAAATAATAATCCATTGGTTTTGGAAGAAGACTTTACTTTGACATCTCTTGATCTTTCACACAACACCTTGAGTGGAAATCTTTCTTCAAACATGAAGGAGCTTCATAATTTGTCATATCTCAATCTATGTAACAACAAATTGGAAGGTACTATTCCTAATGATCTTCCAGATGCATTAAGAGGATTCAATGTGTCCTTTAATAATTTTTCTGGTGTTGTACCTGATAACTTGTTGCAGTTTCCTGAATCAGCATTTCATCCAGGAAATACTATGCTGATATTTCCAAATTCTCAATTATCATCACCAAAAGATTCTTCCAACATAGATTTGAAGGAACATGGGTCACATAAGAAAACCTTCACTAGGAGTGTCTTGATTACATGTTTGGTTACTTTTTCTTTTGTGATAGCTATTATTAGTGCTATGGTTTGTTATAGGATTCATCAGAAAAAAGAAGGAACTTCAAAACAAGATGCAACAATGGATGACATTATAGATAAGAGTGCTTCTCCATCAAAGAGAGAAGAGTCTAAAAGAAATGTGGAATCATTACCACCTTTGGACGATTCCGAAAACATTCATACAACTTTAAAGGGGCTTAAAGATCTTGAGTTTGTTAAGAATGAGGAAGGAACTTCTTCTCCGATGTCGAATCCTTCATCTTCTACAAGCCATCAATTCGAGAATCCTAGCGACTCCCTCAAAGTATCCTCACCAGATAAACTGGTGGGGGACTTGCATCTATTTGATGGATCGTTGATGCTAACTCCAGAAGAACTTTCACTCGCTCCGGCCGAAGTTGTTGGAAGGAGTTGTCATGGAACACTCTACAAAGCTACACTTGAATCTGGTCATGTATTGGCTGTCAAATGGTTAAGAGAAGGAATAACTAAAGGGAAAAAGGAGTTGGCTAGGGAAATGAAGAAACTTGGGACAATTAAGCATCCAAGTTTGGTTTCTTTTCTTGGTTGCTATGTAGGGCCTAAGGAGCATGAGAGATTGATTATATCAAATTACATGAATGCACATTCTTTGGACATTTATCTGCATGAGGCTGAGAAAAGAAATATCCATCCTTTGTCTCTTGATGAAAGGCTCAGGGTAGCCGTAGAAACGGCTCGATGTCTTCTTTTCCTACACGCCGAGAAAACCATACCTCATGGCAATCTCAAATCCACCAACATTCTTATAGAAACTCCCAACAGAAATGTCTTGCTCACTGACTACAGCTTGCACCGAATACTTACTGCCGCAGGTACTTCTGAGCAAGTTCTGAATGCCGGCGCACTCGGTTACTGCCCGCCTGAGTTCGCTAGATCAACCAAACCATGCCCTTCTTTGAAGAGTGATGTCTATGCATTTGGAGTTGTGTTATTAGAGCTCCTAACAGGAATAAAATCAGAAGAAATAGTTTCTGTTGGAGAAGATTACATTAGCAAGTGCTTTGAAAAGTCACTTGTGGATAAGCACAATGGAGAAGAATCATCTAGGAGGATTCTTGATGAAATGCTAAAAGTGGCTCTTAGATGCATTCTTCCAGCATCTGAGAGACCTGATATGAAAACAGTTTTTGATGATCTTTCAACAATAAAGAATAGTTGA 2943 0.3806 MQAMWLMLLLLVDIALGNSDTDALLELKKGIQNDPYGLVLKSWDSKSLESNGCPQNWYGILCSEGNVISITLDNAGLVGEFNFVAISGLTMLHNLSIVNNQFTGSMLHISPMKSLKFLDLSLNKFNGSFPSTFVESRNLVYLNLSSNEFSSTIPPVFRKLEQLKYLDFHSNSFSGDIMNIFYQMGSVLHVDLSSNKFSGTLDLGLGDVSFLFSIRYLNVSYNSLTGELFAHDGMPYLDNLEVFDASNNQLVGNIPSFAFVVSLRILRLSCNHLTGSFPETLLKESSMMLSELDLSQNKLEGPIGSITSMTLRKLNISSNKFSGPLPLKLGHCAIIDLSNNMLSGNLSRIKYWGNYVELIQLSSNSLSGTLPNETSQFLRLTSLNVSNNSLEGFLPPVLGTYLELKVIDLSLNQLSGFLLPALFASTKLTTLNLSNNKFSGPIPFQLPNNNPLVLEEDFTLTSLDLSHNTLSGNLSSNMKELHNLSYLNLCNNKLEGTIPNDLPDALRGFNVSFNNFSGVVPDNLLQFPESAFHPGNTMLIFPNSQLSSPKDSSNIDLKEHGSHKKTFTRSVLITCLVTFSFVIAIISAMVCYRIHQKKEGTSKQDATMDDIIDKSASPSKREESKRNVESLPPLDDSENIHTTLKGLKDLEFVKNEEGTSSPMSNPSSSTSHQFENPSDSLKVSSPDKLVGDLHLFDGSLMLTPEELSLAPAEVVGRSCHGTLYKATLESGHVLAVKWLREGITKGKKELAREMKKLGTIKHPSLVSFLGCYVGPKEHERLIISNYMNAHSLDIYLHEAEKRNIHPLSLDERLRVAVETARCLLFLHAEKTIPHGNLKSTNILIETPNRNVLLTDYSLHRILTAAGTSEQVLNAGALGYCPPEFARSTKPCPSLKSDVYAFGVVLLELLTGIKSEEIVSVGEDYISKCFEKSLVDKHNGEESSRRILDEMLKVALRCILPASERPDMKTVFDDLSTIKNS 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01861 980 PANTHER OS07G0626500 PROTEIN 1 978 - -
Car02g01861 980 SUPERFAMILY L domain-like 235 449 - -
Car02g01861 980 Gene3D Transferase(Phosphotransferase) domain 1 787 980 - -
Car02g01861 980 Gene3D Ribonuclease Inhibitor 357 453 IPR032675 -
Car02g01861 980 Gene3D Ribonuclease Inhibitor 454 545 IPR032675 -
Car02g01861 980 MobiDBLite consensus disorder prediction 598 632 - -
Car02g01861 980 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 1 978 - -
Car02g01861 980 Pfam Leucine Rich Repeat 379 396 IPR001611 GO:0005515
Car02g01861 980 SUPERFAMILY Protein kinase-like (PK-like) 712 974 IPR011009 -
Car02g01861 980 Pfam Leucine Rich repeat 425 440 IPR001611 GO:0005515
Car02g01861 980 Pfam Leucine Rich repeat 459 472 IPR001611 GO:0005515
Car02g01861 980 Gene3D Phosphorylase Kinase; domain 1 708 786 - -
Car02g01861 980 Pfam Leucine rich repeat 137 197 IPR001611 GO:0005515
Car02g01861 980 Pfam Leucine rich repeat N-terminal domain 18 63 IPR013210 -
Car02g01861 980 Gene3D Ribonuclease Inhibitor 18 180 IPR032675 -
Car02g01861 980 ProSiteProfiles Protein kinase domain profile. 709 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01861 980 SUPERFAMILY Outer arm dynein light chain 1 454 526 - -
Car02g01861 980 Pfam Protein tyrosine and serine/threonine kinase 713 972 IPR001245 GO:0004672|GO:0006468
Car02g01861 980 Gene3D Ribonuclease Inhibitor 181 356 IPR032675 -
Car02g01861 980 MobiDBLite consensus disorder prediction 598 639 - -
Car02g01861 980 MobiDBLite consensus disorder prediction 657 683 - -
Car02g01861 980 SUPERFAMILY L domain-like 19 307 - -
Car02g01861 980 MobiDBLite consensus disorder prediction 656 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01861 Car-Chr2 48904464 48909733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01861 91 977 Receptor kinase-like Gene Family AT5G07280 30.899 1.38e-78 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car02g01861 PK_Tyr_Ser-Thr 1.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01861 - - cam:101512473 1924.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01861 02 48904464 48909733 Car02g01861 02 48904464 48909733 ECH