Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01856 atggaagacaaaatagtaagaccaagtgaacaacaacaacccataagatgtaaagcggcggtttgtcgcaaagcaggtgaggcactgattattgaagagatatttgtagcaccaccaatgccacatgaagctcggattcgaattatatgtacctctctctgttacagtgatatcactttctggaagatgcaggagcctcctgcaatttttccaaggattctgggtcatgaggcaattggGGTAGTGGAAAGTGTTGGAGAGGAAGTAACTGAAGTTACAAAAGGAGACATTGTTGTCCCAATTTTCATGCCTGATTGTGAAGAGTGTATAGATTGCAAATCAAAAAAGAGCAACCTTTGTTCAAAGTTTCCTTTTAATATTTCACCTAGGATGCTTAGACATGATTCTTCAAGATTCACTGATCTAAATGGAGAGATTATAAACCATTTCATGTGTATCTCTAGTTTTAGTGAGTACACTGTCGTTGACATTGCAAATCTACTCAAGATTGATTCATCAATTCCTCCCAATAGGGCATGCCTCCTTAGTTGTGGTGTATCAACAGGGGTAGGTGCTGCTTGGAGAACAGCAAATGTAGAGCCAGGGTCTACAGTAGCTGTTTTTGGACTAGGATGCATTGGATTAGCAGTTGCTGAGGGAGCTAGACTTTGTGGAGCAACTAGGATTATTGGTGTAGATATCAACCCACAAAAATTTGACATTGGAAAGAAGTTTGGTCTCACAGATTTTGTCCATGCTGGAGAATGTGAAAACAAATCTGTTAGCCAGGTTATTATGGAGATGACTGGTGGGGGAGCAGATTATTGTTTTGAATGTGTTGGTATGGCATCATTGGTGCATGAAGCATATGCTTCATGTAGAAAGGTCTATTTCTATCTCAAACTATGCCTAATTTTTATTTGA 924 0.2879 MEDKIVRPSEQQQPIRCKAAVCRKAGEALIIEEIFVAPPMPHEARIRIICTSLCYSDITFWKMQEPPAIFPRILGHEAIGVVESVGEEVTEVTKGDIVVPIFMPDCEECIDCKSKKSNLCSKFPFNISPRMLRHDSSRFTDLNGEIINHFMCISSFSEYTVVDIANLLKIDSSIPPNRACLLSCGVSTGVGAAWRTANVEPGSTVAVFGLGCIGLAVAEGARLCGATRIIGVDINPQKFDIGKKFGLTDFVHAGECENKSVSQVIMEMTGGGADYCFECVGMASLVHEAYASCRKVYFYLKLCLIFI 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01856 307 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 75 89 IPR002328 GO:0008270|GO:0016491
Car02g01856 307 Pfam Alcohol dehydrogenase GroES-like domain 41 169 IPR013154 -
Car02g01856 307 Gene3D - 196 301 - -
Car02g01856 307 SUPERFAMILY GroES-like 11 197 IPR011032 -
Car02g01856 307 Pfam Zinc-binding dehydrogenase 213 295 IPR013149 -
Car02g01856 307 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 174 295 IPR036291 -
Car02g01856 307 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 10 296 - -
Car02g01856 307 Gene3D - 10 195 - -
Car02g01856 307 PANTHER ALCOHOL DEHYDROGENASE 10 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01856 Car-Chr2 48837887 48841421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01856 43 187 Monolignol Biosynthesis Gene Families AT4G37970 28.571 3.26e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01856 K00121 - gmx:100806887 491.5