Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01837 ATGACCACAACAACTAGTTGTTCCACTAGAATTTTCACACTCTTGTTGATTATTTCTTTTTTCCATCATGGTGCTTTTACTCTTTCCTCTGATGGGTTGACTCTTTTGTCACTTTTGACACATTGGACTTTTGTTCCTACTCTCATCAGCTCTACTTGGAATGCTTCTGATTCCACTCCATGTTCATGGATTGGTGTTGAATGCGACCATACCCACAATTTGATTTCCCTTAACCTCACTGGTCATGGGATTTTTGGTCAACTTGGACCAGAAATAGGAAACCTTTATCACTTGCAGACCCTTTTGTTGTTGAGTAATGGTTTCTCAGGAAAAGTTCCTTTAGAGTTAAGCAACTGTAGTTTTCTGGAGTATTTAGACCTTTCTGGGAACAGATTCAGTGGAAAAATACCATATAGCTTGAAAAAGTTGCAAAATTTACAGTTTATGAGATTGTCTTCCAATCTGCTGACTGGTGAAATTCCAGATTCCTTGTTTGAAATTCCTTCCCTTGAAGAAGTGAGCCTGCATAGTAACCTTCTTAGTGGCCTTATCCCAAATAATATTGGAAACTTGACTCAATTGTTGAGGTTGTATCTGTATGCTAATCAGTTGTCAGGGACTATTCCTTCTTCCATTGGTAATTGCAGTAAATTGGAGGACCTTGAACTGTCTTTCAACCGTTTGAGAGGTGAAATTCCAGTAAGTATTTGGAGAATTCAAAGTCTTGTGCATATCTTGGTTCACAACAACAGTCTTTCTGGGGAACTATCTTTGGAGATGACAAAGCTCAAGTATCTGAAAAATATCTCTTTGTTTGACAATCAATTCTCAGGAGTGATACCTCAAAGCTTGGGAATCAACAGTAGCTTAGTGAAGTTGGATTGTATGAATAATAAGTTCACTGGTAATATCCCTTCAAATCTTTGCTTTGGAAAGAAATTGAGTGAACTCAATATAGGAAGCAATCAACTTCAAGGTGGCATACCTTCTGATGTAGGAAGATGTGCAACTTTGAGGAGGTTGATTCTCAGTGAAAATAATTTAACTGGGTCTCTTCCTGATTTTGAAAGTAGTATGAACTTCAAATACATGGACTTGAGCAAGAACAATATTAGTGGATCGATTCCATCAAGTTTGGGAAATTGCACAAATATAACATACATAAATTTGTCATTGAACAAATTTGCAGGGCTCATACCATCAGAGCTTGGAAACCTGTTGAATCTTGAGATTTTGGATCTTGCTCACAACAAATTTGAAGGTCCTTTGCCTCATCAGCTGTCAAATTGTACTAAAATGGACCGTTTTGATGTTGGATTCAATTTTCTAAATGGTTCATTGCCATCGAGTTTGAGAAGTTGGACGGGCATAACCACATTGATTTTAAGAGAAAATAACTTCACAGGGGGTATCCCAGGATTTTTAGCAGAATTTAGCAACCTTCGCGAGTTACAACTTGGTGGAAACTCGCTTGGAAGCAAAATTCCTCAATCAATTGGGAAATTGCATAATCTGTTTTATGGATTGAATCTGAGTGCCAATGGATTGACAGGTGAAATTCCTACAGAAATTGGGAAGCTAGTACAGTTGCAAAGTCTGGACATATCCTTGAACAATTTGACAGGAAGCATAGATGCTCTTGAAGGTCTTGTTTCATTAATTGAGGTAAATGTTTCTTACAATTTCTTCAATGGTTCTGTACCAACAGGTCTTATGAAGTTATTGAATTCCTCACCATCATCATTCATGGGTAATCCTCTCCTATGTGTTAGTTGTTTGAATTGCATTAAAACTAGTTATGTAAATGTATGTGTCTACAAATCAACTGATCACAAAGGCATCAATAAAGTACAAATTGTGATGATAGAACTTGGATCCTCAATATTTATTTCTGCTATGCTGGTATTAATAATTCGGATTTATCTCCGTAGAAAGGAATTGAAAAAGGCCTCTTATCTTAAGCCACAGCTTAAGATCTCAACTGAAAAGGAGTCGCCTTACCTTCAAGAGCTGGTGTTGGAGGCTATAAAGAACCTAAATGATTTGCCTATTATTGGTAGTGGAGCACATGGTATTGTGTACAAAGTCATAATTGATCAAGATGTTTTTGCTTTAAAGAAGGTTGAATTTGGATGGAAGAAGGAAAAGCGGCTGAGTATCATACACAACGAAGTTGAAGTCCTTAAGGAGCTTAGGCATCGAAATTTGATCAAATGCCTAAAATGCTGGATTACAAAGGAATATGGTGCAATCTTATATCCATTCATGAAAAATGGAAGCCTTCATGATATTTTGCATGAAAAGAAACCCCCACCACCCTTAACGTGGAATGTTCGGTTTAATATAGCTGTTGGAATTGCTCACGGACTAGCTTATCTGCATTATGATTGTGGTTCCCCAATAGTGCACCGAGACATCAAACCAAAGAACATACTTGTTGACGACGATATGGAGCCTATTATAGCTGATTTTGGCACTGCCCTATACAAGCTGTCTGATGATTCTGATATTCATTCTAACACCAGGAAAATGCTTTCGTCGCAAGTTGTTGGAACCCCTGGCTATATTGCACCAGAGAATGCGTATGATATAGTGCCGGGAAGAAAGTCTGATGTATATAGCTACGGAGTTGTGTTGCTCGAGCTAATAACCAGAAAGAAAATGTTAGTTCCCTCTCCGAATAATGAGGCGGAGGAGATCCACATAGTGTCATGGGCTAGATCTGTTTGGCTGGAAAAGGGCAAAATTGAGAAGATTGTTGATCCATACCTTGCAAATGCATTTCCAAATTCAGTAGCACTAGCCAAGCAAGTGGCTGCAGTGCTTTCATTGGCATTACAATGCACAGAGAAGGATCCACGAAAGAGGCCAACCATGAAAGGTGTTATTGGCTTTTATAATATGAACTTGTTTAAGCAGAGGTGTGATGAGGTGGAATATGGTGATGGACTTGCAGTTAAACTGATGGGAAATGGTAAGATTCATGTTGAAAAGATTGTAGGCGTAGATGATCTAGTTGTTCCAAAAATTGTCTATGCTAGTCCTAGTTTGATCTTCCTTCCCTCTGTCACTGGTCCAATACTCACCACACCTTTCAACTGGTTTTTCCTCACACGTTGGGGCCAATATAGGCATCTGCAGAATTCCTTGTATTTGCAGCCCAAATCATACTTCTCTATAAACACCAATCAAACCGAGTCTGTTAAGAGTCTCACATTGGTGGACAATCCTCATCTTACAAACCGGTTTTGTAAGGATAGAATTAGGCCAAACTCCAATTCTAAGAGAGGCAATATTGTGAATAACAGTGGAAAAAATTACAAAGGTAGGCGACAAAAGAAGAGAGAGCTTCAGAAATTGACGTCGATGGATGGTGGACTGTATGTGCCAACCTAA 3396 0.3855 MTTTTSCSTRIFTLLLIISFFHHGAFTLSSDGLTLLSLLTHWTFVPTLISSTWNASDSTPCSWIGVECDHTHNLISLNLTGHGIFGQLGPEIGNLYHLQTLLLLSNGFSGKVPLELSNCSFLEYLDLSGNRFSGKIPYSLKKLQNLQFMRLSSNLLTGEIPDSLFEIPSLEEVSLHSNLLSGLIPNNIGNLTQLLRLYLYANQLSGTIPSSIGNCSKLEDLELSFNRLRGEIPVSIWRIQSLVHILVHNNSLSGELSLEMTKLKYLKNISLFDNQFSGVIPQSLGINSSLVKLDCMNNKFTGNIPSNLCFGKKLSELNIGSNQLQGGIPSDVGRCATLRRLILSENNLTGSLPDFESSMNFKYMDLSKNNISGSIPSSLGNCTNITYINLSLNKFAGLIPSELGNLLNLEILDLAHNKFEGPLPHQLSNCTKMDRFDVGFNFLNGSLPSSLRSWTGITTLILRENNFTGGIPGFLAEFSNLRELQLGGNSLGSKIPQSIGKLHNLFYGLNLSANGLTGEIPTEIGKLVQLQSLDISLNNLTGSIDALEGLVSLIEVNVSYNFFNGSVPTGLMKLLNSSPSSFMGNPLLCVSCLNCIKTSYVNVCVYKSTDHKGINKVQIVMIELGSSIFISAMLVLIIRIYLRRKELKKASYLKPQLKISTEKESPYLQELVLEAIKNLNDLPIIGSGAHGIVYKVIIDQDVFALKKVEFGWKKEKRLSIIHNEVEVLKELRHRNLIKCLKCWITKEYGAILYPFMKNGSLHDILHEKKPPPPLTWNVRFNIAVGIAHGLAYLHYDCGSPIVHRDIKPKNILVDDDMEPIIADFGTALYKLSDDSDIHSNTRKMLSSQVVGTPGYIAPENAYDIVPGRKSDVYSYGVVLLELITRKKMLVPSPNNEAEEIHIVSWARSVWLEKGKIEKIVDPYLANAFPNSVALAKQVAAVLSLALQCTEKDPRKRPTMKGVIGFYNMNLFKQRCDEVEYGDGLAVKLMGNGKIHVEKIVGVDDLVVPKIVYASPSLIFLPSVTGPILTTPFNWFFLTRWGQYRHLQNSLYLQPKSYFSINTNQTESVKSLTLVDNPHLTNRFCKDRIRPNSNSKRGNIVNNSGKNYKGRRQKKRELQKLTSMDGGLYVPT 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01837 1131 Gene3D Ribonuclease Inhibitor 453 596 IPR032675 -
Car02g01837 1131 PANTHER OS08G0446200 PROTEIN 6 976 - -
Car02g01837 1131 ProSitePatterns Protein kinases ATP-binding region signature. 685 706 IPR017441 GO:0005524
Car02g01837 1131 SMART LRR_typ_2 143 167 IPR003591 -
Car02g01837 1131 SMART LRR_typ_2 527 549 IPR003591 -
Car02g01837 1131 SMART LRR_typ_2 406 430 IPR003591 -
Car02g01837 1131 SMART LRR_typ_2 191 215 IPR003591 -
Car02g01837 1131 SMART LRR_typ_2 478 502 IPR003591 -
Car02g01837 1131 Gene3D Ribonuclease Inhibitor 191 357 IPR032675 -
Car02g01837 1131 SMART serkin_6 679 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01837 1131 ProSiteProfiles Protein kinase domain profile. 679 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01837 1131 Gene3D Phosphorylase Kinase; domain 1 671 755 - -
Car02g01837 1131 ProSiteProfiles Leucine-rich repeat profile. 529 551 IPR001611 GO:0005515
Car02g01837 1131 SUPERFAMILY RNI-like 269 586 - -
Car02g01837 1131 MobiDBLite consensus disorder prediction 1090 1115 - -
Car02g01837 1131 Gene3D Ribonuclease Inhibitor 358 452 IPR032675 -
Car02g01837 1131 Pfam Protein kinase domain 682 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01837 1131 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Car02g01837 1131 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 6 976 - -
Car02g01837 1131 SUPERFAMILY L domain-like 52 351 - -
Car02g01837 1131 Gene3D Transferase(Phosphotransferase) domain 1 756 978 - -
Car02g01837 1131 ProSitePatterns Serine/Threonine protein kinases active-site signature. 801 813 IPR008271 GO:0004672|GO:0006468
Car02g01837 1131 Gene3D Ribonuclease Inhibitor 30 188 IPR032675 -
Car02g01837 1131 SUPERFAMILY Protein kinase-like (PK-like) 667 963 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01837 Car-Chr2 48637881 48648449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01837 74 963 Receptor kinase-like Gene Family AT1G73080 45.856 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car02g01837 Pkinase 3.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01837 - - mtr:MTR_5g087370 1517.67