Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01836 ATGTCGGATGACATGTTGGTTCATTTTTCGTCAAACTCTTCCAACCAATCGGATCAGTCTTTGCCTACAAAGATTGCTAAGTTGGAAGCTCGAATGGTTGGAAAAGCTTCCTCTGCTGCTTCCCAGCAACAAGGTTGGTCCTCTGTTTCTTCAGCTGGGAAATACAGTGGACCAGCTGAAGAGTTGGTTGAACCTTGCAGTTCCAGTGATTCTGATGATGATAATGGTGGCGAATTCTTGATTCAAGCCAACACGCGGAAGCGCCTTAAACTTCAAGAAGATGATAATGCTGATGTTTTTGAACGTGTTGAGGTTGTTGCTGATGGAAGACAAACCAGTTTGGAGGCCGTGGAGACAAAAAATAATGTTGATGCAAATAGAAAGAAATCTGGTCGTGGAAGAGGGAGTTCTGGTTCAGGTAGGGGTCGTGGTTCCAAAAGTAATGATCAGACCAGAACACAAATTTCTCCCCCAACAATTTCATCCTCAAATGGCCAGATTGAGAATAAAGATGGTAGACTCAGAGATCAGTTTCATAATGATAATAGTGCTTCATTAGAGGATGAGAATGCATCTTTACGTGCAAAAGTTGCTGTGTTGGAGGAAGACTTGCGTAAAGCAAAGCTAGAAACCTCTGAGCATCAGAACCTTCGCCAACAGTTAGAAAAGGAACTGAAGGAACTGAGAGATCTTGAACAGCAAATGAAGCCTAAGAGAACAAAAATAATATCTGATTTGCTGATATCAGTTTCAAAGGCTGAGAGACAAGAAGCAAGGCTAAAAGTACGACAAGACTCGTTGAGACTTGGAAATGTTGGTGTAATCAGAGCTGGAACTGTCTTATCTGAGACCTGGGAAGATGGTCAGGCGTTAAAGGATCTGAATGCCCAGCTTAAACAACTGCTAGAAACAAAGGAGGCAATTGAGCGGCAGCGCAAGTTATTTAAGAAAAAACAATCTGATAAGACTGATGGAATCGATGCAGAGGCTGGATTACTGGAAGATGTTCTCATTCATGATGAAATCTATAAATCTCGACTAGCCAGCATTAAAAGGGAAGAAGAAGTTGTTTTGCGAGAGAGGGATCGCTATGAACTAGAGAAGGGAAGACTAATTCGTGAAATGAAACGCATACGGGATGAAGATGGTTCGCGTTTCAACAACTTTCAGATTCTAAACCATCGCTACGCCCTTCTAAACCTTCTTGGAAAGGGAGGATTCAGCGAGGTGTACAAGGCTTTTGACTTGGTGGATCATAGATACGTCGCTTGCAAGCTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAACAAAGTTACATAAGACATGCAATTCGGGAGTATAACATTCACAAGACCTTGGTCCATCGTCACATTGTTCGTTTATGGGACATCTTTGAGATTGATCCAAATACATTCTGCACTGTTCTAGAGTATTGCAGCGGGAAAGATCTTGATGCTGTTCTTAAAGCAACGCCTATTTTGCCTGAGAGGGAGGCTAGGGTCATTTTAGTTCAGATTTTTCAAGGCCTTATTTACATGAATAAAAGAACACTGAAGATTATTCATTATGATTTAAAGCCGGGAAATGTTTTGTTTGATGAGCTTGGTATTGCCAAAGTAACTGATTTTGGTCTTAGCAAGATAGTGGAGAATGATGTGGGATCCCAGGGCATGGAGCTTACATCTCAGGGGGCTGGAACATATTGGTATTTGCCGCCTGAATGCTTTGAGCTCAGCAAAACACCTCTTATATCATCCAAGGTTGATGTCTGGTCTGCTGGTATTCTGTTCTACCAAATGCTCTTTGGCAGGCGTCCTTTCGGACATGACCAAACACAAGAGAGAATACTTCGTGAAGACACAATTATTAAGGCACGCAAGGTCGAATTTCCCCCTAAACCTACCGTTTCTAATGAGGCAAAGGAATTTATTCGGCGGTGTCTAACATATAACCAGGGCGAGAGACCAGATGGTTCCTCAGTTCCTTTCTTGATTGCAACTGTACATAGTCAAAATTTTCAAAACTTCCTTCAACAAAGTAGTAAGCCATATTACATACCGGAAGCTACAATTAACCTTACCAAAATAGTAAAGAAAGCTTCAACTTCAACTTTGCTACTCCATTCTACTCAACTTTCTCCCAGGTTTGGTTATGATAGTTTCAACATGTTTATTAAGCAGGTTGTGATTGAAGGTTTCAAGAGTTACCGAGAGCAAATTGCCACAGAGGATTTCAGTCCTAAAGTTAATTGTGTTGTTGGTGCTAATGGATCTGGTAAAACAAACTTTTTCCATGCCATTCGATTTGTATTGAGTGATCTCTTTCAGAACCTACGCAGTGAGGATAGGCATGCACTACTCCATGAAGGGGCTGGACACCAGGTTTTATCTGCATTTGTGGAGATTGTGTTTGATAATTCGGACAATCGTATCCCGGTTGATAAGGAGGAAGTGCACTTACGCCGGACAATTGGTTTGAAAAAGGATGAATATTTTCTCGATGGAAAACACATAACAAAAACTGAAGTGATGAATTTACTGGAAAGTGCTGGGTTCTCTCGTTCAAATCCATATTATGTTGTACAACAAGGAAAGATAGCATCTCTAACCTTGATGAAAGACTCTGAACGGTTGGATTTACTGAAGGAAATAGGTGGTACTAGAGTTTATGAGGAGAGGCGTCGTGAAAGTTTGAAAATAATGCAGGATACTGGCAAGTCTTTCCTACttttttGTAACAAACGAAAACAAATTATCCAAGTTGTACAGTATTTAGACGAGAGGTTGAAGGAACTAGATGAGGAGAAAGAGGAGCTTAGAAAATATCAGCAATTTGACAAGCAGAGAAAATCGTTGGAATATGCCATATATAACAAAGAAGTTCTAGATGCTCAGCAAAAACTTGTAGAGATAGAAGAAGCTCGGACCAAAATTTCTGAAATATCAGCAAAGAAGTATAATGAGGTTCTTGATGCACATGAAAAATCCAAAGATTTGGAGAATAATTTGAAAGATATAACAAAGGAACTTCAAAACTTGAACAAAGAAAAAGAAGTTATTGAAAAGCGACGAACATCGGCACTAAAGAAGCACACAGAGCTTGAGCTTGATGTCAAAGACTTACAAGAGAAGAGATCTAGAAATATCCGTTCCAAAGAAGATGCTGCAAAACAATTGGAGATACTTGAGAATGAAATTAAAGACTCAATGAATGAGCTGGACAAAATCCGTCCTTTATACGATGATCAAGTTCAGAAAGAAAAAGACATTGCTAAGCGAATAATGGAGCGCGAGAAGCAACTCAGTATACTTTATCAAAAGCAAGGGCGTGCAACACAGTTTTCGAGTAAAGCTGCTCGTGATAAGTGGCTTCAAAAGGAGATTGATGATCTTGAACGGGTGCTCTCTTCAAACACAACGCAGGAGAAAAAGCTGATTGAAGAAATTGTACGGCTTAATGATGAAATGCATGGTTGTGATGAGAATATCAAGAGCCGTAGAACAAATATTACTACTTTAGAATCTCAAATTGCTCAGTCACGTGAAGGGTTTAACAATTATAAAGTAGAAAGAGACGAGCTTCATGATCAGAGGAAGTCCTTATGGAGCCGAGAGAATAAACTTACTGCTGAAATTGATAAATTGAGAGCTGAAGTTGAGAAGGCTGAAAAGAGTCTTGATCATGCAATTCCTGGAGATGTCAGAAGAGGGCTGAATTCAGTTCGGAAGATCTGCAAAAGTCAAAACATTTCTGGAGTTCACGGCCCAATTATTGAGTTGCTGAACTGTGATGAAAAGTTTTTCACCGCGGTTGAAGTTACTGCAGGAAACAGCTTGTTTCATGTGGTTGTTGAAAATGATGACAAGTCAACCCAGATAATTAAACATCTTAATCAACAAAAAGGTGGACGCGTTACATTCATTCCACTTAACAGAGTACATACTCCACGTGTCACTTATCCACAGAGTTCTGATGTCATACCTCTTTTAAAGAAATTGAATTTTAAACATGATTACACTCCAGCATTTAGTCAGGTATTTGCTAGAACAGTTATCTGCAAGAATCTGGATGTGGCTTCAAAGGTAGCTCGTACAGATGGTTTGGACTGCATAACTCTGGAAGGTGATCAAGTAAGCAAAAAAGGTAGTATGACCGGAGGATTTTATGATCACCGAAGATCAAGATTGAAGTTTATGAATATCATTAAGCAGAATACTGACAGTATTCACATTAGAGAGCAGGAATTGGAGGAAATAGACCAAAAGATTAACGAACTTGTTGCTGAGCAGCAGAAGATTGATGCACAATGTGCGCATAACAAATCAGAGATGGAAGAGCTTAAACAGGACATTGCTAATTCTAACAAACAGAAGCAATTAATTTCTAAAGCACTTGCAAAGAAGGAGAAATCACTTGTTGATGTCAATAATCAGATCGAACAGCTTAAGACTAGCATTGCTACGAAAGAAGACGAGATGGGCACAGATCTCATTGATCATTTAACACCAGAAGAGAAAAAGCTTTTGTCAGATTTGAACCCTGAAATCAAAGACCTTAAGGAGAAGCTCGTTGCATGCAAGACTGATCGCATTGAGACTGAAGCACGGAAAGCAGAGTTGGAAACTAATCTAACCACTAATCTTAGGAGAAGAAAACAAGAGCTGGAGGCTGTAATATCATCTGTCGATGCTGACTCTATGGTTGTTGATGCTGAATTGAAAGAGCGGGAACTGAATGATGCTAAAATATTGGTTGATGATGCATCAGAGCAGCTTACAAGATTTTCTGAAAGAATAAGTAATCAAACCAGGCAAATTAAACAGATCAAAGATGAAATGAATAAATTTAAGTCATTGGAGGAAGAGTATAACAGAAAACTTCAGGAAGAAGCTAAAGAATTAGAGCAATTGCTGGGTAAAAAGCATACATATTCTCTTAAAGAAGAAGAAAATACCAAGAAAATAAGGGAACTTGGCCCATTAACATCAGATGCTTTTGAGGCGTACAAACGGAGGAATATTAAAGATTTGCTAAAGATGTTGCACAGGTGCAACGAGCAATTGCAACAGTTTAGTCATGTCAACAAGAAAGCACTGGATCAGTACATCAATTTTACAGAACAGCGAGAAGAACTTCAGAAAAGACAAGCTGAACTTGATGCAGGAGATGAGAAAATCAGAGAGCTAATATCAGTGTTAGATCAACGGAAGGATGAATCAATAGAACGCACTTTCAAAGGTGTTGCTAGGCATTTCCGAGAAGTATTCTCTGAACTTGTACAGGGGGGTCATGGTTATCTGGTTATGATGAAGAAGAAGgatggtgatcatgatgatgatgatcaagatgaggatgGTCCTCGTGAAGCAAATCCAGAAGGGAGAGTAGAAAAGTACATTGGAGTTAAAGTGAAGGTATCTTTTACTGGACAAGGGGAAACACAGTCCATGAAGCAGTTGTCGGGGGGTCAAAAAACTGTTGTTGCCCTTACACTTATCTTTGCCATACAAAGATGCGATCCGGCTCCCTTTTATCTGTTTGACGAGATTGATGCAGCATTGGATCCACAGTACAGAACTGCTGTTGGAAATATGATCCGGCGCCTGGCAGACATAGCAAACACTCAATTTATCACGACAACATTCCGCCCTGAGCTAAATTCATTAATCAGGATCAGACGCACAATGCTGAATAAGGTGTTTCTACTCGCATGA 5721 0.3952 MSDDMLVHFSSNSSNQSDQSLPTKIAKLEARMVGKASSAASQQQGWSSVSSAGKYSGPAEELVEPCSSSDSDDDNGGEFLIQANTRKRLKLQEDDNADVFERVEVVADGRQTSLEAVETKNNVDANRKKSGRGRGSSGSGRGRGSKSNDQTRTQISPPTISSSNGQIENKDGRLRDQFHNDNSASLEDENASLRAKVAVLEEDLRKAKLETSEHQNLRQQLEKELKELRDLEQQMKPKRTKIISDLLISVSKAERQEARLKVRQDSLRLGNVGVIRAGTVLSETWEDGQALKDLNAQLKQLLETKEAIERQRKLFKKKQSDKTDGIDAEAGLLEDVLIHDEIYKSRLASIKREEEVVLRERDRYELEKGRLIREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKAFDLVDHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLVHRHIVRLWDIFEIDPNTFCTVLEYCSGKDLDAVLKATPILPEREARVILVQIFQGLIYMNKRTLKIIHYDLKPGNVLFDELGIAKVTDFGLSKIVENDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPPKPTVSNEAKEFIRRCLTYNQGERPDGSSVPFLIATVHSQNFQNFLQQSSKPYYIPEATINLTKIVKKASTSTLLLHSTQLSPRFGYDSFNMFIKQVVIEGFKSYREQIATEDFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSEDRHALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVHLRRTIGLKKDEYFLDGKHITKTEVMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQDTGKSFLLFCNKRKQIIQVVQYLDERLKELDEEKEELRKYQQFDKQRKSLEYAIYNKEVLDAQQKLVEIEEARTKISEISAKKYNEVLDAHEKSKDLENNLKDITKELQNLNKEKEVIEKRRTSALKKHTELELDVKDLQEKRSRNIRSKEDAAKQLEILENEIKDSMNELDKIRPLYDDQVQKEKDIAKRIMEREKQLSILYQKQGRATQFSSKAARDKWLQKEIDDLERVLSSNTTQEKKLIEEIVRLNDEMHGCDENIKSRRTNITTLESQIAQSREGFNNYKVERDELHDQRKSLWSRENKLTAEIDKLRAEVEKAEKSLDHAIPGDVRRGLNSVRKICKSQNISGVHGPIIELLNCDEKFFTAVEVTAGNSLFHVVVENDDKSTQIIKHLNQQKGGRVTFIPLNRVHTPRVTYPQSSDVIPLLKKLNFKHDYTPAFSQVFARTVICKNLDVASKVARTDGLDCITLEGDQVSKKGSMTGGFYDHRRSRLKFMNIIKQNTDSIHIREQELEEIDQKINELVAEQQKIDAQCAHNKSEMEELKQDIANSNKQKQLISKALAKKEKSLVDVNNQIEQLKTSIATKEDEMGTDLIDHLTPEEKKLLSDLNPEIKDLKEKLVACKTDRIETEARKAELETNLTTNLRRRKQELEAVISSVDADSMVVDAELKERELNDAKILVDDASEQLTRFSERISNQTRQIKQIKDEMNKFKSLEEEYNRKLQEEAKELEQLLGKKHTYSLKEEENTKKIRELGPLTSDAFEAYKRRNIKDLLKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAGDEKIRELISVLDQRKDESIERTFKGVARHFREVFSELVQGGHGYLVMMKKKDGDHDDDDQDEDGPREANPEGRVEKYIGVKVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVGNMIRRLADIANTQFITTTFRPELNSLIRIRRTMLNKVFLLA 1906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01836 1906 Coils Coil 1573 1642 - -
Car02g01836 1906 Coils Coil 1411 1494 - -
Car02g01836 1906 Gene3D - 1313 1392 - -
Car02g01836 1906 ProSitePatterns Serine/Threonine protein kinases active-site signature. 522 534 IPR008271 GO:0004672|GO:0006468
Car02g01836 1906 Gene3D - 724 901 IPR027417 -
Car02g01836 1906 MobiDBLite consensus disorder prediction 107 170 - -
Car02g01836 1906 Gene3D - 1126 1220 - -
Car02g01836 1906 MobiDBLite consensus disorder prediction 36 80 - -
Car02g01836 1906 Gene3D - 1242 1395 - -
Car02g01836 1906 Coils Coil 291 318 - -
Car02g01836 1906 Coils Coil 1697 1717 - -
Car02g01836 1906 Gene3D Transferase(Phosphotransferase) domain 1 387 717 - -
Car02g01836 1906 Coils Coil 991 1046 - -
Car02g01836 1906 MobiDBLite consensus disorder prediction 140 168 - -
Car02g01836 1906 SMART serkin_6 396 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01836 1906 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 725 1890 - -
Car02g01836 1906 Coils Coil 956 986 - -
Car02g01836 1906 Coils Coil 347 381 - -
Car02g01836 1906 MobiDBLite consensus disorder prediction 1772 1796 - -
Car02g01836 1906 CDD ABC_SMC3_euk 727 890 IPR041741 GO:0005524|GO:0016887
Car02g01836 1906 SUPERFAMILY Protein kinase-like (PK-like) 393 667 IPR011009 -
Car02g01836 1906 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 725 1890 - -
Car02g01836 1906 CDD STKc_TLK 395 659 - -
Car02g01836 1906 Gene3D - 1710 1902 IPR027417 -
Car02g01836 1906 Coils Coil 1054 1074 - -
Car02g01836 1906 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1582 1891 IPR027417 -
Car02g01836 1906 MobiDBLite consensus disorder prediction 1 21 - -
Car02g01836 1906 ProSiteProfiles Protein kinase domain profile. 396 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01836 1906 Coils Coil 1518 1538 - -
Car02g01836 1906 Coils Coil 183 241 - -
Car02g01836 1906 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 725 1889 IPR027417 -
Car02g01836 1906 SMART SMC_hinge_2 1253 1365 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Car02g01836 1906 Coils Coil 917 951 - -
Car02g01836 1906 Pfam Protein kinase domain 397 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01836 1906 SUPERFAMILY Smc hinge domain 1205 1407 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Car02g01836 1906 ProSitePatterns Protein kinases ATP-binding region signature. 402 425 IPR017441 GO:0005524
Car02g01836 1906 Pfam RecF/RecN/SMC N terminal domain 726 1888 IPR003395 -
Car02g01836 1906 MobiDBLite consensus disorder prediction 36 54 - -
Car02g01836 1906 Pfam SMC proteins Flexible Hinge Domain 1253 1364 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Car02g01836 1906 Coils Coil 1207 1227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01836 Car-Chr2 48606203 48635235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01836 379 692 MAP Kinase Kinase Kinase AT3G13530 26.852 1.45e-25 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Car02g01836 SMC_N 1.3e-47 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01836 K06669 - gsj:114400455 1959.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01836 02 48606203 48635235 Car02g01836 02 48606203 48635235 ECH